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deadman_932



Posts: 3094
Joined: May 2006

(Permalink) Posted: Oct. 02 2006,07:51   

Let me try to give you an analogy that even you might be able to see, AirHead.

Suppose some guy comes up to you and wants to argue that the Gospels were all faked, and  he "knows" this.

You listen to his claim and he starts ranting about things that have nothing to do with the gospels, they sound bizarre and twisted, like some weird version of the book of Mormon combined with Wicca.

You question the guy and discover he doesn't KNOW the Gospels and has in fact only looked them over superficially once or twice, flipping through them and not really reading them.

How would you feel about the guy's arguments that the gospels were all fraudulent, given his level of "knowledge?"

This is how most of your arguments sound to me, and I suspect that others here feel pretty much the same.

Your claims about relatedness above...your ignorance about chimp-human relatedness, your claims that fruitflies should "mutate into superfruitflies" or FISH, for Chrissakes...it just screams "stupid." It's a bizarre parody of what evolutionary theory IS, just as you caricatured geology, and #### near everything you've ever tried to pervert in science. Like I said...it's surreal.

--------------
AtBC Award for Thoroughness in the Face of Creationism

  
ericmurphy



Posts: 2460
Joined: Oct. 2005

(Permalink) Posted: Oct. 02 2006,07:52   

Quote (afdave @ Oct. 02 2006,12:11)
You guys have been preaching to me about how similar organisms have similar genetic sequences, i.e. chimps and humans are within 1.5% of each other, right?  And you are correct.  Similar homologies yield similar genetics.  I agree with you there.

But now you are telling a new whopper!

You really want me to believe that a 500 myo bacterium (let's say we could get some DNA from a bacterium fossil) is much different than a modern bacterium?  Now all of a sudden, instead of similar homologies yielding similar genetics, you're telling me "Oh yes, ancient bacteria LOOKED very similar to modern bacteria, but we are quite sure that their genetics would be far different ... probably the same 65% difference."

Come on, guys!  This is ridiculous!  You are GUESSING what ancient bacterial genetics might have been like and you are CONTRADICTING the guideline you just finished giving me about similar morphologies=similar genetics.

What in the world?

Dave, Dave, Dave. Where are you getting this "looks similar means they have similar genotypes"? What does that have to do with evolutionary theory? No one has said anything at all about similar morphologies here. It's a complete non-sequitor.

What people have been saying is that all eukaryotes living today are equally distantly-related to all bacteria living today. What does that have to do with morphology? Do insects and jellyfish look anything alike? Do either one of them look anything like a redwood? What does appearance have to do with it? The point is, all are descended from a common ancestor that diverged once from bacteria, and therefore all three are equally distant genetically from bacteria.

No wonder everyone here thinks they're talking to, well, not a macaque; that would be insulting to a macaque.

--------------
2006 MVD award for most dogged defense of scientific sanity

"Atheism is a religion the same way NOT collecting stamps is a hobby." —Scott Adams

  
carlsonjok



Posts: 3326
Joined: May 2006

(Permalink) Posted: Oct. 02 2006,07:52   

Quote (ericmurphy @ Oct. 02 2006,12:36)
There is no "ladder of life," Dave. There's a tree of life. Take two leaves at opposite sides of the tree. Which one is further from the roots?

Forgive me, but I am a simple engineer, but do I understand that it is a matter of distance rather than complexity/similarity?  Would a fair metaphor be:

Dave lives in Kansas City. If he hops on I-70W and drives 600 miles he will be pretty close to Denver..  If he drives the same distance on I-70E he will be in Richmond, IN.  The same distance on I-35N takes him to Duluth, MN.  Lastly, 600 miles on I-35S would land him about half way between Dallas-FortWorth and Waco.  Now, no one would confuse Denver for Duluth or rural Indiana for rural Texas, but all are equidistant from Kansas City?

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It's natural to be curious about our world, but the scientific method is just one theory about how to best understand it.  We live in a democracy, which means we should treat every theory equally. - Steven Colbert, I Am America (and So Can You!)

  
ericmurphy



Posts: 2460
Joined: Oct. 2005

(Permalink) Posted: Oct. 02 2006,07:58   

Quote (carlsonjok @ Oct. 02 2006,12:52)
Forgive me, but I am a simple engineer, but do I understand that it is a matter of distance rather than complexity/similarity?  Would a fair metaphor be:

Dave lives in Kansas City. If he hops on I-70W and drives 600 miles he will be pretty close to Denver..  If he drives the same distance on I-70E he will be in Richmond, IN.  The same distance on I-35N takes him to Duluth, MN.  Lastly, 600 miles on I-35S would land him about half way between Dallas-FortWorth and Waco.  Now, no one would confuse Denver for Duluth or rural Indiana for rural Texas, but all are equidistant from Kansas City?

Bingo!

Get it now, Dave?

No? Well, color me surprised.

--------------
2006 MVD award for most dogged defense of scientific sanity

"Atheism is a religion the same way NOT collecting stamps is a hobby." —Scott Adams

  
stevestory



Posts: 13407
Joined: Oct. 2005

(Permalink) Posted: Oct. 02 2006,07:58   

Quote (deadman_932 @ Oct. 02 2006,13:15)
What's amusing is that this is analogous to a guy arguing against ...oh, say algebra...while not knowing the commutative, distributive and associative properties of multiplication. It's surreal.

Isn't it though? This thread could be renamed "A Stubborn Idiot Confronts Freshman Science"

(Somewhere in cyberspace, on a math discussion board...)

ArmyDave: "G A L O I S  W A S  W R O N G"
Occam'sQ-Tip: "Do you know what a group is?"
ArmyDave: "N O  B U T  A S  S O O N  A S  Y O U  T E L L  M E  I ' L L  T E L L  Y O U  W H Y  Y O U ' R E  W R O N G"

   
ScaryFacts



Posts: 337
Joined: Aug. 2006

(Permalink) Posted: Oct. 02 2006,07:59   

Quote (deadman_932 @ Oct. 02 2006,13:51)
Let me try to give you an analogy that even you might be able to see, AirHead.

Suppose some guy comes up to you and wants to argue that the Gospels were all faked, and  he "knows" this.

You listen to his claim and he starts ranting about things that have nothing to do with the gospels, they sound bizarre and twisted, like some weird version of the book of Mormon combined with Wicca.

You question the guy and discover he doesn't KNOW the Gospels and has in fact only looked them over superficially once or twice, flipping through them and not really reading them.

How would you feel about the guy's arguments that the gospels were all fraudulent, given his level of "knowledge?"

This is how most of your arguments sound to me, and I suspect that others here feel pretty much the same.

Would you mind if I posted a link to this quote (or used this quote with a reference) elsewhere?

This is a huge problem as I try to talk to Christians who seem to think they can easily refute evolution without having the slightest idea what they are talking about.  This analogy is perfect for them.

   
deadman_932



Posts: 3094
Joined: May 2006

(Permalink) Posted: Oct. 02 2006,08:04   

Scary : Oh, heck no, feel free to use anything I post.

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AtBC Award for Thoroughness in the Face of Creationism

  
afdave



Posts: 1621
Joined: April 2006

(Permalink) Posted: Oct. 02 2006,08:22   

Go ahead ... spin a couple of pages of rhetoric to your heart's content.

I've hit on something here with this crazy (new to me) idea that ...

"Ancient" bacterial DNA is just as different from modern bacterial DNA as modern bacterial DNA is from human DNA.

As far as I can tell ... A TOTAL GUESS!

Wow!  That was worth all the effort today to discover that little gem!  I will look forward to finding out how different strains of modern bacteria compare genetically.  And hearing what justification you have for believing this little bolded statement above.

I think very few people on this thread really understand what a big deal this is.

Outta time!  See you tomorrow!

This will be fun!

******************************

Eric and Carlson ... you're out in left field.  I suggest re-reading carefully.

--------------
A DILEMMA FOR THE COMMITTED NATURALIST
A Hi-tech alien spaceship lands on earth ... DESIGNED.
A Hi-tech alien rotary motor found in a cell ... NOT DESIGNED.
http://afdave.wordpress.com/....ess.com

  
ScaryFacts



Posts: 337
Joined: Aug. 2006

(Permalink) Posted: Oct. 02 2006,08:23   

Thanks Dead_Man.

Just one more thing...I want to encourage you guys and gals to keep this up.  I know many of you are likely frustrated but the lurkers (and pseudo lurkers like me) are learning tons.   With each new volley we get another piece of the puzzle.

And since you are trying to make it understandable to Dave, it's understandable to the rest of us.  Which is pretty cool.

   
incorygible



Posts: 374
Joined: Feb. 2006

(Permalink) Posted: Oct. 02 2006,08:34   

Quote (afdave @ Oct. 02 2006,12:31)
Incorygible...  
Quote
Yes, in a truly neutral region of DNA (i.e., a molecular clock), a 500 myo bacterilum is MUCH different than a modern bacterium.
How do you know this?  Are you just guessing?  How about in the Cytochrome C?  Do you say the same?

How about you read the definition of a molecular clock in that Nature paper I sent you before accusing me of "guessing" regarding something that is a defining characteristic of the term in question.

But seeing as how you don't even have a rudimentary understanding (less than high school biology) of what you're talking about, that's probably as far as you'll be able to get in that paper.

As to how we know that molecular clocks work, that's old ground that I'm not interested in covering again (especially since you don't even know the basics of common descent well enough to understand it). Please pick up a textbook.

As for the specifics of cytochrome C versus a truly neutral clock, I have my reservations (even though the data seem to match up well with everything else we know, including other clocks). As a coding region, cytochrome CANNOT be truly neutral in selection, but because it is a highly conserved protein it seems to work well enough as one of the first clocks (we have more and better clocks now). In any case, the data it provides are consistent with our theoretical expectations.

  
deadman_932



Posts: 3094
Joined: May 2006

(Permalink) Posted: Oct. 02 2006,08:37   

Quote
"Ancient" bacterial DNA is just as different from modern bacterial DNA as modern bacterial DNA is from human DNA.

Tell me this guy doesn't have some kind of learning disability.

Scary: You're much too kind, but...it makes it all worthwhile. That's what many of us hoped -- that it would allow for people to get a sense of the topics and make better debaters out of everyone. I've learned stuff from just about everyone here, I can't think of an exception other than Dave, since he's really just parroting arguments from others.

--------------
AtBC Award for Thoroughness in the Face of Creationism

  
ericmurphy



Posts: 2460
Joined: Oct. 2005

(Permalink) Posted: Oct. 02 2006,08:37   

Quote (afdave @ Oct. 02 2006,13:22)
I've hit on something here with this crazy (new to me) idea that ...

"Ancient" bacterial DNA is just as different from modern bacterial DNA as modern bacterial DNA is from human DNA.

As far as I can tell ... A TOTAL GUESS!

Wow!  That was worth all the effort today to discover that little gem!  I will look forward to finding out how different strains of modern bacteria compare genetically.  And hearing what justification you have for believing this little bolded statement above.

I think very few people on this thread really understand what a big deal this is.

Outta time!  See you tomorrow!

This will be fun!

******************************

Eric and Carlson ... you're out in left field.  I suggest re-reading carefully.

Dave, so what if it's a total guess? So what if it's totally wrong (especially since no one will ever know for sure)? What does it have to do with your point? You expect some living eukaryotes to be more closely related to living bacteria than others are. Therefore, you think that Denton's chart, which shows no such thing, proves that evolutionary theory is wrong.

But you're wrong, Dave, because all living eukaryotes are equally distantly-related to living bacteria. They're also all equally distantly-related to the bacteria of a billion years ago. So even if Incorygible is completely wrong about the sequence difference between ancient and modern bacteria, that helps your case not one iota. So why are you crowing about this statement? It has absolutely nothing to do with anything, whether it's right or wrong.

Dave, everyone on this thread understands that this is a non-issue, except for one person: you.

And Dave, I'm no evolutionary biologist (to put it mildly), but I've forgotten more about evolutionary theory than you'll ever know. You're not just out in left field; you're out of the ballpark, out of the county, shit, you're completely out of the state! (to rougly paraphrase Janice Joplin).

And as I suspected, Carlson's analogy went right over your head, despite the fact that it should have been clear to a bright seven-year-old.

--------------
2006 MVD award for most dogged defense of scientific sanity

"Atheism is a religion the same way NOT collecting stamps is a hobby." —Scott Adams

  
k.e



Posts: 1948
Joined: Mar. 2006

(Permalink) Posted: Oct. 02 2006,08:38   

AFD is like the little kid waiting for something to fall off a truck.

Quote
Go ahead ... spin a couple of pages of rhetoric to your heart's content.

I've hit on something here with this crazy (new to me) idea that ...

"Ancient" bacterial DNA is just as different from modern bacterial DNA as modern bacterial DNA is from human DNA.

As far as I can tell ... A TOTAL GUESS!


Wrong order there AFD lets see how that should go.



Quote
I've hit on something here with this crazy couple of pages of rhetoric, A TOTAL GUESS

"Ancient" bacterial DNA is just as different from modern bacterial DNA as modern bacterial DNA is from human DNA.

As far as I can ... spin this crazy idea that ...
has gone to my head


--------------
The conservative has but little to fear from the man whose reason is the servant of his passions, but let him beware of him in whom reason has become the greatest and most terrible of the passions.These are the wreckers of outworn empires and civilisations, doubters, disintegrators, deicides.Haldane

   
BWE



Posts: 1902
Joined: Jan. 2006

(Permalink) Posted: Oct. 02 2006,08:39   

Quote (argystokes @ Sep. 27 2006,17:09)
Unfortunately, Dave felt compelled to turn off comments (and erase those already there) after BWE said the poop word or something.

But Dave, why did you erase all the existing comments, such as mine?

Is that a problem?

Ice cores?

Portuguese?

--------------
Who said that ev'ry wish would be heard and answered
When wished on the morning star
Somebody thought of that, and someone believed it
Look what it's done so far

The Daily Wingnut

   
incorygible



Posts: 374
Joined: Feb. 2006

(Permalink) Posted: Oct. 02 2006,08:44   

Quote (afdave @ Oct. 02 2006,13:22)
Go ahead ... spin a couple of pages of rhetoric to your heart's content.

I've hit on something here with this crazy (new to me) idea that ...

Dave, with the "Eureka" of a veritable Sherlock Holmes, uncovers (nay, "hits upon" or "nails us down on") the most basic element of what we have been trying to drill into his skull for months now.


Quote
"Ancient" bacterial DNA is just as different from modern bacterial DNA as modern bacterial DNA is from human DNA.


Paging Dave, once again:

Please add the words "selectively neutral" to the appropriate locations in this "little gem". You wouldn't want to misrepresent me, would you? Not when I can easily link to the relevant clarifiers in my statements.

Quote
As far as I can tell ... A TOTAL GUESS!

Wow!  That was worth all the effort today to discover that little gem!  I will look forward to finding out how different strains of modern bacteria compare genetically.  And hearing what justification you have for believing this little bolded statement above.

I think very few people on this thread really understand what a big deal this is.


I can name one in particular who hasn't figured it out yet...

  
k.e



Posts: 1948
Joined: Mar. 2006

(Permalink) Posted: Oct. 02 2006,08:53   

It's just occured to me that AFD has never had an original thought.

Note how gleeful he gets when he manages to find something he can twist into his warped reality.

He must have stars in his eyes dreaming of making it big in Demon City.

He knows he's on a hiding to nothing, but like some bottom feeding planton feeder he thinks that by hanging around long enough he will gobble up enough dertritus falling into his dim dark high pressure world he will be able to re-surface like some heroic Greek sea god and claim victory over the surface inhabitants.

AFD I hope your gills clog up.

--------------
The conservative has but little to fear from the man whose reason is the servant of his passions, but let him beware of him in whom reason has become the greatest and most terrible of the passions.These are the wreckers of outworn empires and civilisations, doubters, disintegrators, deicides.Haldane

   
incorygible



Posts: 374
Joined: Feb. 2006

(Permalink) Posted: Oct. 02 2006,08:55   

Quote (argystokes @ Oct. 02 2006,12:36)
Considering the dearth of noncoding DNA in bacteria, I suspect molecular clock techniques would not be particularly useful even if we had 500 myo DNA.

Most definitely. A host of other practical problems would also present itself in calibrating an "ideal" clock, were we to find it.

This is where we run into problems. It would be easy if we merely had to SIMPLIFY things for Dave. But no, we have to SIMPLETON-IFY things, and even then they don't catch.

Hopefully others will note (even if Dave doesn't) that I have tried to include the appropriate caveats (which are certainly neccessary to someone who understands this at a level higher than the EB) when making inevitable gross over-simplifications in the hopes of getting something to stick in Davey's brain.

But yes, in trying to reduce this to terms a 6-year-old could understand, the subtleties of reality get lost.

Dave will no doubt "nail us down" on other (perceived) incongruities (like my use of "evolved" vs. Eric's, for example). I'll just continue to laugh (as I have been all morning), not only at the posts, but at the idea of Dave reading the Nature chimp paper I sent him.

  
k.e



Posts: 1948
Joined: Mar. 2006

(Permalink) Posted: Oct. 02 2006,09:07   

Someone here will know this, but don't some bacteria have 'more' DNA than humans?

Also what is the rough count of unique bacteria?

Watch this AFD

My guess is that the tree diagram that OA posted above even if it had every unique fish, animal etc, both alive and extinct individually listed would pale into insignificance compared to a tree with just  bacteria.

--------------
The conservative has but little to fear from the man whose reason is the servant of his passions, but let him beware of him in whom reason has become the greatest and most terrible of the passions.These are the wreckers of outworn empires and civilisations, doubters, disintegrators, deicides.Haldane

   
ericmurphy



Posts: 2460
Joined: Oct. 2005

(Permalink) Posted: Oct. 02 2006,09:20   

Quote (afdave @ Oct. 02 2006,11:33)
Ah yes.  I see I may be confusing you by talking about "moving left on the chart."  

I do understand that sunflowers and penguins, for example, are NOT in the "human branch" or "trunk" or whatever you call it.

Dave, I know I'm wasting my time on you, but let me see if I can at least clear up some confusion for the lurkers, who seem to be getting a lot more out of this than you are.

None of the organisms that you are talking about are on the "'human branch' or 'trunk' or whatever you call it." Do you have brothers or sisters, Dave? Or cousins? Are any of those people on the "Dave branch" or "trunk" or whatever you want to call it? No. You're not descended from any of those people. In the same way, humans are no more decended from "worms or fish" than they are sunflowers or penguins. You're totally looking at this the wrong way, Dave, and until you can get clear what the phylogenetic tree looks like, it's impossible for you to get anywhere with this discussion.

What you need to understand is this. The only difference between sunflowers, penguins, worms, and fish is how far back in time you need to go to find the common ancestor of each of them and humans. None of them is an "ancestor" of humans (or of anything else alive today).

If you go back in time, you'll find that penguins and humans diverged from a common ancestor at some point. So we don't get into quibbles about "deep time," let's just call that x years ago. Now, if you go further back in time, you'll find that humans and fish diverged from a common ancestor at an earlier time, say, x + y years ago. At that point in time, there were no humans or penguins, or anything that looked like either one. There were fish, and that was it for that particular branch on the phylogenetic tree.

Now, if you go back further, you'll find the common ancestor of humans and worms, at a time = x + z years ago, where z > y. You'd have to go back further to find the common ancestor of humans and sunflowers.

But none of these organisms—sunflowers, penguins, worms or fish—is directly ancestral to humans. How could they be? They're no more ancestral to humans than your brothers or sisters or cousins are ancestral to you. And that's the part where your misunderstanding of evolutionary theory really trips you up. You seem to believe that evolutionary theory proposes that at some point, fish stopped evolving, except for those certain fish that continued to evolve towards humans. It doesn't work that way, Dave, and that's a fatal flaw in your understanding of evolutionary theory, and will prevent you from ever constructing an argument against it that won't be immediately shredded and, more to the point, wrong.

You need to get this clear in your head RIGHT NOW, Dave, if you have a prayer of arguing the topic: no organism alive today is in any sense "ancestral" to humans. Or to any other organism, for that matter.

And the sad fact is, Dave, if you'd read the Theobald article I sent you five months ago, you'd already understand all of this, and you could be discussing evolutionary theory with some hope of making any sense. Right now, you're not criticizing evolutionary theory at all: you're criticizing your own misapprehended version of it that has essentially nothing to do with the real theory.

--------------
2006 MVD award for most dogged defense of scientific sanity

"Atheism is a religion the same way NOT collecting stamps is a hobby." —Scott Adams

  
Mike PSS



Posts: 428
Joined: Sep. 2006

(Permalink) Posted: Oct. 02 2006,09:35   

What the he** happened?  I go away to the dentist this morning and all Evo he** breaks loose.  We went from Isochrons to Eukaryotes pretty quick.
Quote (afdave @ Oct. 02 2006,10:47)
EVOLUTIONISTS NEED DEEP TIME FOR THEIR THEORY TO WORK

**********************************

Mike PSS (Alias "Current Torch Bearer for Team Evo")--

I am waiting for you to show me how Mineral Isochrons prove Deep Time.

AFDave,
Well I'm surprised at your attitude here.  I thought I was engaging you.  Instead I'm dealing with a someone that yells "Nyah, Nyah, Nyah!" at people.

First Dave, you haven't indicated any comprehension about Isochrons, radionucleide decay, or anything else for that matter.  Now I'm the torch bearer for a team I never knew existed?  Nowhere in my statements do you find biology, evolution, or genotype arguments.  Just chemistry, physics, geology, mechanics, math, etc.  

So, One last chance to continue engaging in a debate style manner (which you have accused me of not wanting to participate.  i can get that quote if you want).  At present my summary is challanging your "...all Isochrons are best described as mixing lines..." assertion.  
Quote
AFDAVE,
What do you find wrong with my summary about whole rock Isochrons?

I can't begin to mention time until you address this issue.  Your assertions about mixing lines doesn't even need time or half-lives mentioned.  Only that the method of testing whole rock samples to create Isochron graphs is valid.

Please review and respond to the summary.  If you have any questions about it then ask.

You don't want people on this board to believe all the nasty things they're saying about you.

I'm engaging you intellectually and your ignoring this chance to raise your game.  I'm not name calling or impugning your character (SHAME k.e, SHAME).  I do use sarcasm and inuendo all the time, but it's not Ad Hominum.  In fact, my last post this morning I showed all my cards in how I would challange your assertions.  Pretty fair on my part wouldn't you say?

Mike PSS

  
incorygible



Posts: 374
Joined: Feb. 2006

(Permalink) Posted: Oct. 02 2006,10:03   

Quote (ericmurphy @ Oct. 02 2006,13:37)
Dave, so what if it's a total guess? So what if it's totally wrong (especially since no one will ever know for sure)? What does it have to do with your point? You expect some living eukaryotes to be more closely related to living bacteria than others are. Therefore, you think that Denton's chart, which shows no such thing, proves that evolutionary theory is wrong.

But you're wrong, Dave, because all living eukaryotes are equally distantly-related to living bacteria. They're also all equally distantly-related to the bacteria of a billion years ago. So even if Incorygible is completely wrong about the sequence difference between ancient and modern bacteria, that helps your case not one iota. So why are you crowing about this statement? It has absolutely nothing to do with anything, whether it's right or wrong.

Let's clear up any confusion here (e.g., Re: "even if Incorygible is completely wrong about the sequence difference between ancient and modern bacteria").

What I said was:

 
Quote
Yes, in a truly neutral region of DNA (i.e., a molecular clock), a 500 myo bacterilum is MUCH different than a modern bacterium. The difference between old bacterium and new bacterium would be very similar to the difference between human and old bacterium IN THIS NEUTRAL REGION. If you want to talk about non-neutral (e.g., coding) regions (does that remind you of a heading in the human-chimp table?) that are under the purview of natural selection, we can expect that modern bacteria are more similar to ancient bacteria than humans are (but we can't know how similar, unless we can study fossil morphologies to make educated guesses about certain genes).


The differences I am speaking of in the second sentence are in the TIMES (they are "clocks", after all) read from the respective molecular clocks (Dave will see something similar -- tau-species and tau-genome -- in the Nature paper I sent him). The amount of genetic divergence would, necessarily, be great enough (and resolved enough) to read these times. Furthermore, there would have to be cause to believe that the region of DNA in question was truly selectively neutral and had remained such since divergence. Finally, there would have to be cause to believe that mutation rates were regular and conserved across comparisons. In other words, I tried to simplify to Dave's grade-school level by omitting any talk about mutation rates (why they would be different for prokaryotes vs. eukaryotes), what would comprise truly neutral DNA, whether it exists in prokaryotes, generation-times, and other considerations. But I was very clear that I was talking about a region of DNA that would constitute a molecular clock -- NOT any region of DNA, and certainly not ALL the DNA.

I did not say that any particular sequence difference (especially across the entire genome!;) between ancient bacteria and modern bacteria vs. human and ancient bacteria would be the same. I did not say that we have such a "true" molecular clock up to the task.

I was illustrating that a molecular clock, in principle, would (practically by definition) reveal the same time since divergence from ancient bacteria for both modern bacteria and humans. This is not a guess.  It is, in fact, a bit of a truism if you understand phylogeny. For Dave, it's a momentous discovery (especially when you misrepresent it!;).

I say this right now, so I can link to it when Dave inevitably claims (AGAIN) that I said something along the lines of "the modern bacterial genome is as different from the ancestral bacterial genome as the human genome is".

I did not say this.  This is detailed clarification that I did not say this.

I accept any responsibility for forgetting that one can have no more subtlety than the average sledghammer when trying to teach Dave anything.

However, following this post, any further claim by AFDave suggesting that I said anything remotely similar to "modern bacteria are as genetically different from ancient bacteria as humans are" will be a deliberate misrepresentation (read: a lie).

  
ericmurphy



Posts: 2460
Joined: Oct. 2005

(Permalink) Posted: Oct. 02 2006,10:07   

Quote (Mike PSS @ Oct. 02 2006,14:35)
What the he** happened?  I go away to the dentist this morning and all Evo he** breaks loose.  We went from Isochrons to Eukaryotes pretty quick.

All part of the creationist strategy, Mike. It's like a game of whack-a-mole. You keep knocking Dave's arguments down, one by one, and then he circles around to one you previously knocked down three months ago, hoping you'll have forgotten you already knocked it down once.

It can't have escaped Dave's notice that he's boxed in on the Isochron topic (and he hasn't even addressed about three dozen other radiometric techniques), and he's probably getting weary of banging his head against the wall. So now he's switching to another topic he's so ignorant of it's almost physically painful to watch him blundering around in the weeds of his own misunderstandings. He'll trip and tumble, stagger and stumble around in the phylogenetic undergrowth for a few days, and then circle around to another topic that's already been covered: maybe human/chimp phylogeny, maybe biblical prophesies, maybe Grand Canyon stratigraphy. Or maybe he'll try something brand new, like c decay or something.

Quote
I'm engaging you intellectually and your ignoring this chance to raise your game.  I'm not name calling or impugning your character (SHAME k.e, SHAME).  I do use sarcasm and inuendo all the time, but it's not Ad Hominum.  In fact, my last post this morning I showed all my cards in how I would challange your assertions.  Pretty fair on my part wouldn't you say?

Mike PSS


You have my admiration for your restraint in dealing with Dave, Mike. But in others' (and, occasionally, my) defense, keep in mind that we've been listening to Dave's exasperating drivel for five months now, and endured his incredible, breathtaking intellectual dishonesty that whole time. Occasionally, tempers flare. Unless you're a person of preternatural patience, I predict that if you continue to engage Dave, you'll eventually reach the same state of ennervated impatience. Think of that the next time you find yourself asking Dave the same exact question twenty times in a row, and having him ignore it every single time, and then finally saying, "Mike, you're such a broken record. Why don't you ask me something new?"

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2006 MVD award for most dogged defense of scientific sanity

"Atheism is a religion the same way NOT collecting stamps is a hobby." —Scott Adams

  
Russell



Posts: 1082
Joined: April 2005

(Permalink) Posted: Oct. 02 2006,10:14   

Quote
Someone here will know this, but don't some bacteria have 'more' DNA than humans?
I don't think so. DaveIQ153Scot made this claim in a comment on Panda's Thumb, thinking it supported his ridiculous "frontloading" version of ID. It turns out he failed to recognize a misplaced decimal point in a table he found on "the internets". I had a lot of fun rubbing his nose in that.

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Must... not... scratch... mosquito bite.

  
edmund



Posts: 37
Joined: Jan. 2006

(Permalink) Posted: Oct. 02 2006,10:31   

afdave wrote:  
Quote
To answer Argy's question, I would guess that there is VERY LITTLE sequence difference among modern bacterial DNA.  And I would also guess that there is very little difference between modern and "ancient" bacteria.


Since we can't know what ancient bacteria were like genetically, we can't test that second guess. But we can certainly test the first one.

My guess, afdave, based on evolutionary theory and what I know about the history of life on Earth, is that there is an immense amount of sequence difference among bacteria-- as much, or more than, the variation among all other living organisms put together.

I did a little Googling and found this:
 
Quote
...the animal cytochromes are all very similar to one another and so are the plant sequences (0-30% difference), but cross-comparison of plant and animal sequences results in an average 46% difference....It is seen that few of the bacterial proteins are very similar to one another and that most comparisons show 60% difference.

(courtesy of T. E. MEYER*, M. A. CUSANOVICH*, AND M. D. KAMEN. 1986. Evidence against use of bacterial amino acid sequence data for construction of all-inclusive phylogenetic trees. Proc. Nad. Acad. Sci. USA Vol. 83, pp. 217-220.)

It's an older reference-- I'd prefer something more recent-- but it makes its point: there's a bigger difference between some modern bacteria species than there is between an animal and a plant.

So how did I know that, Dave? Am I psychic? Am I just lucky? Or does evolutionary theory make accurate predictions?

  
ericmurphy



Posts: 2460
Joined: Oct. 2005

(Permalink) Posted: Oct. 02 2006,10:41   

Quote (incorygible @ Oct. 02 2006,15:03)
Let's clear up any confusion here (e.g., Re: "even if Incorygible is completely wrong about the sequence difference between ancient and modern bacteria").

What I said was:

     
Quote
Yes, in a truly neutral region of DNA (i.e., a molecular clock), a 500 myo bacterilum is MUCH different than a modern bacterium. The difference between old bacterium and new bacterium would be very similar to the difference between human and old bacterium IN THIS NEUTRAL REGION. If you want to talk about non-neutral (e.g., coding) regions (does that remind you of a heading in the human-chimp table?) that are under the purview of natural selection, we can expect that modern bacteria are more similar to ancient bacteria than humans are (but we can't know how similar, unless we can study fossil morphologies to make educated guesses about certain genes).

Good explanation, Incorygible, for why you and I gave Dave different answers as to whether modern bacterial genomes would be as different from ancient bacterial genomes as modern eukaryotic genomes would be.

I should also clarify that I had, and have, no reason to suspect that you are in any way wrong about your assertion—your actual assertion, not Dave's caricatured misunderstanding of it. My point was that, even if you were wrong, and that even in neutral regions modern bacteria are much more similar to ancient bacteria than eukaryotes are, that would help Dave's argument not even a tiny bit.

What Dave will never grasp, no matter how many times we spell it out to him, is that the reason all eukaryotes are approximately equally distant genetically from bacteria is because they all diverged from bacteria at the same time. One more time for the learning-impaired, Dave: worms and fish are no more closely related to bacteria than humans are. Would it help if I also put it in all caps and expanded the spacing, or are we clear now?

In other words, Dave, and to quote Wolfgang Pauli, your argument isn't even wrong.

--------------
2006 MVD award for most dogged defense of scientific sanity

"Atheism is a religion the same way NOT collecting stamps is a hobby." —Scott Adams

  
Mike PSS



Posts: 428
Joined: Sep. 2006

(Permalink) Posted: Oct. 02 2006,10:41   

Quote (ericmurphy Posted on Oct. 02 2006 @ 16:07)
You have my admiration for your restraint in dealing with Dave, Mike. But in others' (and, occasionally, my) defense, keep in mind that we've been listening to Dave's exasperating drivel for five months now, and endured his incredible, breathtaking intellectual dishonesty that whole time. Occasionally, tempers flare. Unless you're a person of preternatural patience, I predict that if you continue to engage Dave, you'll eventually reach the same state of ennervated impatience. Think of that the next time you find yourself asking Dave the same exact question twenty times in a row, and having him ignore it every single time, and then finally saying, "Mike, you're such a broken record. Why don't you ask me something new?"

Thanks Eric.  I learned some classic restraint a long time ago.  I was in Air Force maintenance overseas for 6 years before I got my chemEng degree.  The flightline was staffed at half levels so everyone chipped in to get all the jobs done to get to the bar sooner.  All work done on the planes needed documentation that was read and reviewed by all the base staff.  If a pilot consistently wrote up garbage problems on an aircraft you still had to carry out a full operational check which would take time and effort.  We didn't want to waste time with the garbage so for corrective actions we never attacked the idiot pilots name or character, just his intellectual capacity.  Honestly, I've written up a corrective action that says "Switched mode to O-N position, ops ck good."  Sooner, rather than later, the idiot pilot gets ridiculed by HIS peers and stops the garbage write-ups.  And the world regains is ethereal balance.

I've been viewing this thread since its inception.  And PT since before Dover.  I'm not an "evolutionist" or a scientist, but have a well educated family and have been around universities since I was young (stealing laughing gas in lung bags from my grandfathers lab at UW-Madison Hospital for instance).  I've learned a lot from being a lurker.  The one area I find woefully lacking in any ID/C argument is the lack of actual math or data.  Even for the stuff they claim supports their notions.  If AFDave cannot even address and defend basic rebuttals to his arguments then I get to declare victory and move on to counter his next point.  I'm fair and will give him a few chances in front of this forum (even though he doesn't do the same thing back).

At the end of the day, it's all about the beer.

  
incorygible



Posts: 374
Joined: Feb. 2006

(Permalink) Posted: Oct. 02 2006,10:46   

Start your own AFDave TRUTH Search!

Now, you too can convert truth into TRUTH in your spare time from the comfort of your own home. Here's how!

Step 1. Misrepresent a scientific fact or theory. Present this new TRUTH in a bold-capped slogan. Ensure that it contains at least one egregious error in comprehension that no one with a 10th-grade education would make. For extra TRUTH, find a "credentialed" creationist who has made the same error.

Step 2. Get roundly corrected and ridiculed by people who know better.

Step 3. Play dumb. Demand simplification. Repeat your slogan. Ignore any detailed text, references, etc. Instead, demand answers contained within a few simple sentences. Deny the existence of any other replies.

Step 4. Repeat Step 3 as many times as is necessary to ensure that the replies you receive: (1) have reduced all knowledge to simplistic analogies a 6-year-old could understand; (2) have largely removed all qualifiers, footnotes, complications, matters of interest, or suggestions of the larger body of knowledge involved; (3) are dripping with the frustration experienced by teachers of dull pupils.

Step 5. From these latter replies, pick one presented concept you can distort by either: (a) reducing it to your slogan from Step 1; or (b) presenting it as a new misrepresentative slogan with an equal or greater magnitude of error. Note: To do this, you will need to remove any remaining qualifiers and equivocate non-equivocal concepts. You may even have to lie. (For example, if someone writes a simple sentence referring to a selectively neutral region of DNA that can function as a molecular clock, substitute "DNA".) If you choose (a), present your TRUTH as something a vast cabal of misled scientists is trying to hide from prying eyes. If you choose (b), present your new slogan as though this is a "discovery" that you have uncovered against the will of that same cabal. In either case, return to Step 1.

Congratulations! You have brought your very own TRUTH into the world!

  
Russell



Posts: 1082
Joined: April 2005

(Permalink) Posted: Oct. 02 2006,10:54   

Quote
To answer Argy's question, I would guess that there is VERY LITTLE sequence difference among modern bacterial DNA
Why guess? There's tons of sequence data freely available. And - as Edmund pointed out -  the differences between fruitflies' and human's DNAs are minor, compared with the differences between two divergent bacteria.

So, Dave, how come your Ultimate Science Textbook didn't prevent you from making that gaffe?

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Must... not... scratch... mosquito bite.

  
incorygible



Posts: 374
Joined: Feb. 2006

(Permalink) Posted: Oct. 02 2006,11:00   

Quote (ericmurphy @ Oct. 02 2006,15:41)
Good explanation, Incorygible, for why you and I gave Dave different answers as to whether modern bacterial genomes would be as different from ancient bacterial genomes as modern eukaryotic genomes would be.

I should also clarify that I had, and have, no reason to suspect that you are in any way wrong about your assertion—your actual assertion, not Dave's caricatured misunderstanding of it. My point was that, even if you were wrong, and that even in neutral regions modern bacteria are much more similar to ancient bacteria than eukaryotes are, that would help Dave's argument not even a tiny bit.

No worries -- I figured as much. And your actual point is a valid one. I just wanted to get everyone (except the ever-absent Dave) on the same page regarding what was actually said in advance of the inevitable lying distortions.

  
Diogenes



Posts: 80
Joined: July 2006

(Permalink) Posted: Oct. 02 2006,11:30   



Because a sense of scale may help.

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:)

  
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