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incorygible



Posts: 374
Joined: Feb. 2006

(Permalink) Posted: Jan. 03 2007,10:30   

Gee, Dave, thanks for the lecture on basic genetics. It's not like I teach concepts such as alleles, polymorphism and heterozygosity to humanities students (not to mention more advanced concepts in conservation genetics to upper-year science students) every year or anything. (Which reminds me that -- surprise, surprise -- you did not address those lecture slides comparing genetic variation to effective population sizes, including the all-important N=2.)

In your newfound knowledge of these basic concepts, did you happen to run across any explanations for patterns of polymorphism that might give you some sense of equilibrium in this debate? I dunno, maybe a simple equation or something? No need to Weinberg about the math -- it's not Hardy. But if you don't get it right away, no need to fixate on it -- it's just one more thing you don't understand but think you do.

In the meantime, you've stumbled across the proper definition of polymorphism (most common allele at a frequency <95%). Of course, >90% of my artsies got that question right on their midterm, and they're not obnoxiously giving "reviews" of genetics to scientists. But here's one they also got right but you probably wouldn't:

Polymorphism is a measure of genetic diversity within:
(a) individuals
(b) populations
© species
(d) families
(e) created kinds

(Hint: the field you have now stumbled blindly into is known as ____ genetics.)

Because Dave, it's not enough to show that there are generally 1-4 alleles per locus within populations. Never mind those "rare" alleles (that shouldn't exist according to your "CGH") or the many, many exceptional loci that exhibit greater polymorphism (like HLA, which was ignored by you -- not "discussed" -- previously). You have to show 1-4 alleles per locus within a kind, which you have claimed is roughly equivalent to the biological family. Do some homework, Dave, and you might see how laughable this is.

I'm not going to bother with compiling all the evidence to show that you thought Ayala (and your "recombination of existing genetic variation" laugher) was describing genetic diversity as opposed to phenotypic diversity (maybe someone else wants to do this, now that Dave claims he was talking about phenotypic diversity all along). We (myself, Eric, etc.) have been asking you to explain genetic diversity this entire time. Phenotypic diversity was never at issue, but genetic diversity most certainly still is. It has to come from somewhere, Dave. Where? (You know exactly what orifice Eric has suggested.)

And good job at avoiding scripture in your "objective standard". I knew you couldn't do it, dishonest Dave. I'm going to continue to disregard those pieces of biblical information you think are so important, despite your hopes for me (and veiled threats). And it's not because I'm blinded by my atheist worldview. It's because the description of some deity breathing life into dust really doesn't explain anything at all to me about biology, regardless of whatever lightbulbs it flares up in your fevered brain.

The fact remains that you have no objective way of knowing if the created "man" kind initially included chimps (and gorillas and 'rangs). After all, chimps are a VERY closely related species within man's family. How do you know that they are not a fallen offshoot of Adam's line, arisen through exactly the processes you propose and defend for post-Ark biodiversity? You have no basis to claim they are not. Perhaps YOU should be lobbying for ape civil liberties? Wouldn't that be a lark if you get to the pearly gates and God demanded an explanation for those insulting, dehumanizing photos and captions you posted of gorillas on this board, eh?

Thanks for the laughs, and not failing to disappoint in your swan song.

  
ericmurphy



Posts: 2460
Joined: Oct. 2005

(Permalink) Posted: Jan. 03 2007,10:34   

Do you believe this jerk?

     
Quote (afdave @ Jan. 03 2007,07:43)
BASIC GENETICS REVIEW FOR ERIC AND OTHERS
Now I hope no one is insulted by this title ... "Dave!  Giving a refresher course in genetics!  Guffaw!"  And it is true that a few months ago I didn't even know the exact definition of an allele ... I just knew it had something to do with genes. But whether you are insulted or not, you should read this, because judging from some of your comments, I think I now have a better grip on basic genetics than some of you.  I learn quickly. :-)

You're educating us on basic genetics, Dave? I've been trying to get you to understand that no diploid organism can have more than two alleles per locus for months!

   
Quote
GENES, ALLELES AND HETEROZYGOSITY
Terms we all have thrown around alot lately so we need to be clear about them.  We turn to our trusty friend Wikipedia ...            
Quote
The terms Homozygous, Heterozygous and Hemizygous are used to simplify the description of the genotype of a diploid organism at a single genetic locus. At a given gene or position along a chromosome (a locus), the DNA sequence can vary among individuals in the population. The variable DNA segments are referred to as alleles, and diploid organisms generally have two alleles at each locus, one allele for each of the two homologous chromosomes. Simply stated, homozygous describes two identical alleles or DNA sequences at one locus, heterozygous describes two different alleles at one locus, and hemizygous describes the presence of only a single copy of the gene in an otherwise diploid organism.
[URL=http://en.wikipedia.org/wiki/Homozygous%2C_Heterozygous_and_Hemizygous[/URL]


OK.  So are we clear? A diploid organism (an individual) can have two alleles at each locus.  If the alleles are the same -- homozygous.  If different -- heterozygous.  

You're joking, right? How many dozens of times have I pointed this out to you just in the last few weeks, genius? But now you're explaining it to me? Are you for real?

 
Quote
COMMON (OR WILD) ALLELES, MUTATED ALLELES, RARE ALLELES
So we understand individuals.  What about populations?  How many different alleles are there in typical diploid organism populations?  The individual can only have two, but there could be many in a population from which two per individual are selected.  As you would expect, someone has studied this -- G.S. Mani.  According to him, most loci of present-day animals contain between 1 and 5 alleles (disregarding the MHC complex--separate topic discussed already).  (Mani, G.S. 1984. "Darwinian theory of enzyme polymorphism (pp. 242-298) in Mani, G.S., ed., Evolutionary Dynamics of Genetic Diversity. Springer-Verlag, Berlin, Heidelberg, New York.)  Woodmorappe notes ...            
Quote
Since most of the pre-Flood animal pairs could have carried 4 alleles per locus, this means that, in most cases, no mutations need have taken place since the Flood to generate the 1 to 5 alleles per locus seen today.  Of course, most loci have fewer than 4 alleles per locus because the Ark animals did not always carry the maximum possible four per pair, and/or some alleles have been lost since the Flood by genetic drift. (Noah's Ark: A Feasability Study, p.195)
Also, there is a book with a very interesting title that I want to get: The History and Geography of Human Genes (1994) by L.L. Cavalli-Sforza et. al.  This book (which is about humans, not sure if other mammals are discussed) has a table (pp. 8-9) that shows that the overwhelming majority of polymorphic loci have no more than four alleles per locus, very rare variants excepted.  Continuing with info from Woodmorappe ... Furthermore, there is usually a single allele occurring at high frequency (at least 85%), with 1 to 3 other alleles found at frequencies of 1-15%. (MHC Polymorphism and the Design of Captive Breeding Programs - group of 4 »AL Hughes - Conservation Biology, 1991 - Blackwell Synergy, p. 249).  In fact, of all alleles, most exist at low frequency (Considerations on the conservation of alleles and of genic heterozygosity in small managed … PA Fuerst, T Maruyama - Zoo Biology, 1986 - doi.wiley.com, p. 174).  This is further borne out by the very definition of a polymorphic locus: one where the most common allele occurs at no more than 95% frequency in the population. (Inbreeding: one word, several meanings, much confusion. - group of 2 »AR Templeton, B Read - EXS, 1994 - ncbi.nlm.nih.gov, p. 60)


Utterly irrelevant, Dave. That your "hypothesis" can accommodate genes with two, or four, or even six alleles, helps you not even slightly in dealing with the small number of genes that have hundreds of alleles. If they didn't get there through mutations, how did they get there?

How do you get from 10 to 627 HLA-B alleles, Dave?

--------------
2006 MVD award for most dogged defense of scientific sanity

"Atheism is a religion the same way NOT collecting stamps is a hobby." —Scott Adams

  
incorygible



Posts: 374
Joined: Feb. 2006

(Permalink) Posted: Jan. 03 2007,10:58   

Again, please do answer this one, Dave:

Given your proposed and defended post-Flood processes for generating genetic and phenotypic diversity (thousands of species arising from each created kind, with kind~family), how do you KNOW that chimpanzees are not Fallen descendants of Adam? After all, they are not mentioned in the Old Testament (kind of strange for something designed so similarly to Eden's #1 Dominionator, eh?). They are well within the range of any biological standard for kind delineation you have offered (closer than most, actually). That they lack (although not absolutely) in some of the "non-biological" man-makers you have mentioned is easily explained by Sin. Could they not be Fallen men? Should you not be worried about this? Maybe you should be calling for that congressional assessment after all? How do you KNOW that chimps aren't your relative, Dave? There but for the grace of God, perhaps?

  
ericmurphy



Posts: 2460
Joined: Oct. 2005

(Permalink) Posted: Jan. 03 2007,11:02   

Since Dave not only could never bother to answer my questions, and in fact pretended he'd never seen them, and then further had the unmitigated gall to pretend that he was instructing us on these simple, basic facts of elementary genetics, I'll take the liberty of answering them for him:

 
Quote (ericmurphy @ Jan. 02 2007,12:20)
So Dave, just to make this simple for you, and before you waste a lot of your time trying to educate a dunce like me on how a genetic bottleneck won't prevent one "kind" from radiating into a thousand species in a few thousand years, let's try this:

You accept that a diploid organism cannot have more than two alleles at a given locus, correct?

[X]Y
[  ]N

You accept, therefore, that a mating pair of diploid organisms cannot have more than four alleles for a given locus, correct?

[X]Y
[  ]N

Therefore, you accept that, without additional mutations, there cannot ever be any more than four, total, alleles for any given gene in any population that is descended from that initial breeding pair, correct?

[X]Y
[  ]N

I must warn you that failure to answer these three questions will be taken as an admission that you have absolutely no freaking idea what I'm talking about, and therefore don't have the knowledge of straightforward Medelian genetics that any seventh grader should have.

I'm assuming I don't need to supply references for my first two assertions, correct?

[X]Y
[  ]N

Or do I need to prove to you that diploid organisms cannot have more than two alleles for any given gene, and that two plus two equals four?

[ ]Y
[X]N


So therefore, Dave, you are stuck with exactly the huge problem we've been telling you about for months now. You know there could not have been more than 10 HLA-B alleles on the ark, and there are 670 now. You say that "pre-existing variability" is where genetic diversity comes from, and you now know that cannot be true. So where did the extra 570 alleles, come from? Out of your butt?

--------------
2006 MVD award for most dogged defense of scientific sanity

"Atheism is a religion the same way NOT collecting stamps is a hobby." —Scott Adams

  
Lou FCD



Posts: 5455
Joined: Jan. 2006

(Permalink) Posted: Jan. 03 2007,11:04   

110
:D

Hey, when this gets down to a hundred, can we just start singing "A hundred bottles of beer" or something?

Maybe an AFDave version...

--------------
“Why do creationists have such a hard time with commas?

Linky“. ~ Steve Story, Legend

   
ericmurphy



Posts: 2460
Joined: Oct. 2005

(Permalink) Posted: Jan. 03 2007,11:18   

Quote (Lou FCD @ Jan. 03 2007,09:04)
110
:D

Hey, when this gets down to a hundred, can we just start singing "A hundred bottles of beer" or something?

Maybe an AFDave version...

Actually, Lou, I'd prefer that we didn't. Only because Dave will whine that he could have gotten through all of Deadman's questions (he thinks he's answered 15 of them; he's answered zero of them) if only everyone hadn't used up all his messages.

You know he'll do it.

--------------
2006 MVD award for most dogged defense of scientific sanity

"Atheism is a religion the same way NOT collecting stamps is a hobby." —Scott Adams

  
Henry J



Posts: 5786
Joined: Mar. 2005

(Permalink) Posted: Jan. 03 2007,11:44   

I think filler posts shouldn't count toward that 5000 limit.

  
afdave



Posts: 1621
Joined: April 2006

(Permalink) Posted: Jan. 03 2007,12:11   

Cory ... I wasn't lecturing you.  I was lecturing the MVD.  :D
I know you understand this stuff--at least the basic genetics.  I confess I forgot about your slides, but I wouldn't have had time today anyway.  Maybe another day (another forum?)

Explanations for patterns of polymorphism: Have not read many yet, but as you can imagine, I would trust the creationist explanations more because they are more honest, i.e. they don't try to say that their version of "Whodunit" is a proven scientific fact like your camp does.

Cory ...  
Quote
Because Dave, it's not enough to show that there are generally 1-4 alleles per locus within populations. Never mind those "rare" alleles (that shouldn't exist according to your "CGH") or the many, many exceptional loci that exhibit greater polymorphism (like HLA, which was ignored by you -- not "discussed" -- previously). You have to show 1-4 alleles per locus within a kind, which you have claimed is roughly equivalent to the biological family. Do some homework, Dave, and you might see how laughable this is.
It's not laughable at all.  I've cited many papers that show 1-4 alleles per locus in many species.  Are you forgetting that we (creationists) can never definitively demarcate a "kind"?  We can only make educated guesses.  Just as you (Evos) can never definitively prove many things about your theory.  It's not possible because of the historical nature of the inquiry.

And pray tell, what part of this ...

 
Quote
ONLY A FEW ALLELES IN ANY ONE PARTICLUAR GEOGRAPHIC LOCATION
First, Woodmorappe explains that ...      
Quote
 
To begin with, the huge number of alleles, while true of the human race as a whole, obscures the fact that only a few alleles need have arisen (since the Flood) in any one geographical location:      
Quote

Natural selection can clearly act to select new alleles, but in no indigenous population is there evidence for the large numbers of alleles found in modern urban populations.  It seems likely that the large numbers of alleles found in city populations are the results of admixture.  For example, if the two Brazilian tribes we studied were to form a single population, then the number of alleles would almost double and it would require relatively few such amalgamations to bring the number of alleles up to those found in a provincial town of Europe or Asia (The origins of HLA-A, B, C polymorphism. - group of 2 »P Parham, EJ Adams, KL Arnett - Immunol Rev, 1995 - ncbi.nlm.nih.gov, p. 177)
... is unclear to you and Eric?

 
Quote
Phenotypic diversity was never at issue, but genetic diversity most certainly still is. It has to come from somewhere, Dave. Where?
Well then we miscommunicated.  

I have been arguing all along that ...

1) "Dramatic differences" are possible in a very short time, and
2) "Dramatic difference" potential can easily survive a single pair bottleneck simply by inclusion of most common alleles in the pair

I think of "dramatic differences" as "large phenotypic diversity" ... what about you?  I think of "genetic richness" as "high heterozygosity", i.e. inclusion of most common alleles in the bottleneck pair ... how about you?

I thought Eric was trying to refute these two points.

If he (and you) are not ... then Hallelujah!  We agree on something for a change.

 
Quote
The fact remains that you have no objective way of knowing if the created "man" kind initially included chimps (and gorillas and 'rangs).
True, but you also have no objective way of knowing if we share a common ancestor.  Genetics can only give us clues.  We have to turn to other things for more clues.  And to these I have turned.  I am not so myopic or arrogant as to presume that only science can tell us everything there is to know.  

Can science tell me that George Washington lived, was a US president, then died?  No.  I rely on written eyewitness testimony for this.

Can science tell me about the Hittites?  No, not if by science you mean repeatable measurements.  I know about the Hittites through written eyewitness testimony.

And so on and on ...

******************************************

Cory, your science training has limited your vision.  You say you reject anything that you cannot prove scientifically, yet you uncritically accept the proposition that matter organized itself into biological structures in defiance of the very scientific laws that you applaud.

You accept written eyewitness testimony for many things in your life.

You just don't regarding the Origin of Species.

Alas, maybe you will someday.

--------------
A DILEMMA FOR THE COMMITTED NATURALIST
A Hi-tech alien spaceship lands on earth ... DESIGNED.
A Hi-tech alien rotary motor found in a cell ... NOT DESIGNED.
http://afdave.wordpress.com/....ess.com

  
improvius



Posts: 807
Joined: Jan. 2006

(Permalink) Posted: Jan. 03 2007,12:27   

Quote (afdave @ Jan. 03 2007,13:11)
Are you forgetting that we (creationists) can never definitively demarcate a "kind"?  We can only make educated guesses.

You could if they were real.  In fact, it should be the easiest part of creationism to find evidence for.

Can't wait to see your response to dogs and foxes, Dave!

--------------
Quote (afdave @ Oct. 02 2006,18:37)
Many Jews were in comfortable oblivion about Hitler ... until it was too late.
Many scientists will persist in comfortable oblivion about their Creator ... until it is too late.

  
deejay



Posts: 113
Joined: June 2006

(Permalink) Posted: Jan. 03 2007,12:43   

from Tim:

 
Quote
Since that time the thread-starter has begun using the word 'intractable' to describe his YEC position, as well as describing himself as an 'amateur scientist'. The words intractable and scientist form an oxymoron of the highest order, but I'm sure this point is lost on the  thread-starter, just as so many other seemingly simple points are lost.


Well put, Tim.  One of many beautiful pearls tossed to our resident swine.

  
BWE



Posts: 1902
Joined: Jan. 2006

(Permalink) Posted: Jan. 03 2007,13:06   

Quote (Henry J @ Jan. 03 2007,11:44)
I think filler posts shouldn't count toward that 5000 limit.

104  :)

--------------
Who said that ev'ry wish would be heard and answered
When wished on the morning star
Somebody thought of that, and someone believed it
Look what it's done so far

The Daily Wingnut

   
deadman_932



Posts: 3094
Joined: May 2006

(Permalink) Posted: Jan. 03 2007,13:10   

.

AFDave is shocked, SHOCKED to discover the strange new concept of... population genetics!

--------------
AtBC Award for Thoroughness in the Face of Creationism

  
deadman_932



Posts: 3094
Joined: May 2006

(Permalink) Posted: Jan. 03 2007,13:30   

Hah, DenseDave trots out a variation on the musty old creationist standby "WERE YOU THERE?!?" :
Quote
Can science tell me that George Washington lived, was a US president, then died?  No.  I rely on written eyewitness testimony for this.
We have his bones and hair samples. If he was anonymous, with no historical record, we'd still know this man "X" lived and died--via science. There's also an effort to use genetics to trace his descendants. There's also paintings of him--which are not WRITTEN records. Normally, this hoary old chestnut is trotted out to show "there's JUST as much proof that Jesus lived!!" But don't let that stop you in your unending search for fallacies and ways to avoid answering direct questions, Dave.

--------------
AtBC Award for Thoroughness in the Face of Creationism

  
ericmurphy



Posts: 2460
Joined: Oct. 2005

(Permalink) Posted: Jan. 03 2007,13:32   

Quote (afdave @ Jan. 03 2007,10:11)
Cory ... I wasn't lecturing you.  I was lecturing the MVD.  :D
I know you understand this stuff--at least the basic genetics.

Dave, do you even bother to read my posts? You really should; that way it wouldn't take you months to learn things.

How many times have I told you what homozygosity means? How many times have I told you what heterozygosity means? How many times have I told you how many alleles an individual organism's genome can contain for a given gene? Or a mating pair? Or a group of eight individuals, five of whom are related?

You're not "lecturing" me about anything, Dave. You're just parroting back to me what I've been telling you for months. And don't think no one else will notice.

 
Quote
And pray tell, what part of this ...

     
Quote
ONLY A FEW ALLELES IN ANY ONE PARTICLUAR GEOGRAPHIC LOCATION
First, Woodmorappe explains that ...          
Quote
 
To begin with, the huge number of alleles, while true of the human race as a whole, obscures the fact that only a few alleles need have arisen (since the Flood) in any one geographical location:          
Quote

Natural selection can clearly act to select new alleles, but in no indigenous population is there evidence for the large numbers of alleles found in modern urban populations.  It seems likely that the large numbers of alleles found in city populations are the results of admixture.  For example, if the two Brazilian tribes we studied were to form a single population, then the number of alleles would almost double and it would require relatively few such amalgamations to bring the number of alleles up to those found in a provincial town of Europe or Asia (The origins of HLA-A, B, C polymorphism. - group of 2 »P Parham, EJ Adams, KL Arnett - Immunol Rev, 1995 - ncbi.nlm.nih.gov, p. 177)
... is unclear to you and Eric?

It's not unclear. It just doesn't matter. What conceivable difference can it make that individual populations only express a limited number of alleles, Dave? Can you explain what significance that has for your "hypothesis"? You still have to explain where all those alleles came from. You say they're not from mutations. You have finally admitted that they were not present on the ark. That leaves magic, Dave. Is that where you think they came from?

   
Quote
 
Quote
Phenotypic diversity was never at issue, but genetic diversity most certainly still is. It has to come from somewhere, Dave. Where?
Well then we miscommunicated.  

I have been arguing all along that ...

1) "Dramatic differences" are possible in a very short time, and
2) "Dramatic difference" potential can easily survive a single pair bottleneck simply by inclusion of most common alleles in the pair

And you're wrong. Those phenotypic differences come from where, Dave? And you can't pretend that large genotypic differences don't exist, because they do. 627 alleles, Dave. Where did they come from?

 
Quote
I think of "dramatic differences" as "large phenotypic diversity" ... what about you?  I think of "genetic richness" as "high heterozygosity", i.e. inclusion of most common alleles in the bottleneck pair ... how about you?


I thought Eric was trying to refute these two points.

If he (and you) are not ... then Hallelujah!  We agree on something for a change.


"Dramatic" phenotypic differences is a red herring, Dave. There's no clear-cut connection between the amount of phenotypic difference and the amount of genotypic difference. Your argument on this point is irrelevant to your larger problem, which is how you get from a few thousand "kinds" to a few million species in less than five millennia.

So even though you now understand that an organism can have at most two alleles, you still think that one organism can be significantly more heterozygotic than another one? How is that possible, Dave? How do you get new alleles, which you cannot deny exist, and you cannot deny must have arisen after the "flood" other than through mutations? You cannot.

Just because most genes have only a few, maybe one, maybe a handful, of different alleles, does not help you explain where genes with dozens or hundreds of alleles came from.

What you still haven't grasped is that heterozygosity will get you, at most, variation. It will not get you speciation, which is what you need. You need speciation at a rate far beyond anything ever contemplated by standard theories. You need to compress four billion years' worth of speciation into 4,500 years, and "heterozygosity" ain't gonna do it for you.

And you still can't explain where those extra 570 HLA-B alleles came from.

--------------
2006 MVD award for most dogged defense of scientific sanity

"Atheism is a religion the same way NOT collecting stamps is a hobby." —Scott Adams

  
incorygible



Posts: 374
Joined: Feb. 2006

(Permalink) Posted: Jan. 03 2007,13:41   

Quote (afdave @ Jan. 03 2007,12:11)
Cory ... I wasn't lecturing you.  I was lecturing the MVD.  :D

You're simply not in a position to lecture anybody about genetics, Dave. My breadth-course students -- most of whom had not had any biology whatsoever beyond grade 10 general science -- have no trouble remembering concepts such as alleles and heterozygosity. Punnett squares (which you earlier trumpeted almost as though they were some insightful AiG contribution) are, what, grade 7 material?

 
Quote
I know you understand this stuff--at least the basic genetics.  I confess I forgot about your slides, but I wouldn't have had time today anyway.  Maybe another day (another forum?)


Yes, I do. And I'm telling you that Eric -- whom you included in your 'review' by name -- has been spot-on in his comments and questions.

 
Quote
Explanations for patterns of polymorphism: Have not read many yet, but as you can imagine, I would trust the creationist explanations more because they are more honest, i.e. they don't try to say that their version of "Whodunit" is a proven scientific fact like your camp does.


That's a joke, right, Dave? I won't bother with the "more honest" bullshit. But I will say that polymorphism has nothing to do with "whodunit". Population genetics, especially at this basic level, is pure, simple math, Dave. You didn't pick up on the clues in my little paragraph about explanations because you don't know one of the most basic concepts involved in the consideration of allele frequencies -- a simple equation that is as obvious as it is useful. And oh yeah -- it doesn't have a thing to do with what you call "macroevolution" (it's actually pure "microevolution", since everything you've been going on about in this vein are concepts related to populations, Davey -- not species, not kinds). So your Creationist sources would be educating you on basic popgen if it helped their case. Odd that you haven't come across it, no? But trust me -- virtually all the people you presumed to lecture know exactly what I was talking about.

 
Quote
Cory ...      
Quote
Because Dave, it's not enough to show that there are generally 1-4 alleles per locus within populations. Never mind those "rare" alleles (that shouldn't exist according to your "CGH") or the many, many exceptional loci that exhibit greater polymorphism (like HLA, which was ignored by you -- not "discussed" -- previously). You have to show 1-4 alleles per locus within a kind, which you have claimed is roughly equivalent to the biological family. Do some homework, Dave, and you might see how laughable this is.
It's not laughable at all.  I've cited many papers that show 1-4 alleles per locus in many species.  Are you forgetting that we (creationists) can never definitively demarcate a "kind"?  We can only make educated guesses.  Just as you (Evos) can never definitively prove many things about your theory.  It's not possible because of the historical nature of the inquiry.


There you go, trying to equivocate kinds and species again, Dave (neither of which is accurate in this case). A kind (as you have had to define it to fit them all on your boat) is not a species, nor is it a population (for which we actually measure allele frequencies). How many populations make up a typical species? How many species make up a typical kind? Without that information, you cannot extrapolate your mined generality of 1-4 alleles per locus within a sampled population to anything as meaningful as, "see, these are the 1-4 God-implanted alleles for this kind". That's what's laughable, Dave. Tell you what -- you show me that this 1-4 alleles per locus broadly applies to biological families (pick a few representatives -- your choice!;), as opposed to a single species or population, and I will investigate your claims.

 
Quote

And pray tell, what part of this ...

     
Quote
ONLY A FEW ALLELES IN ANY ONE PARTICLUAR GEOGRAPHIC LOCATION
First, Woodmorappe explains that ...          
Quote
 
To begin with, the huge number of alleles, while true of the human race as a whole, obscures the fact that only a few alleles need have arisen (since the Flood) in any one geographical location:          
Quote

Natural selection can clearly act to select new alleles, but in no indigenous population is there evidence for the large numbers of alleles found in modern urban populations.  It seems likely that the large numbers of alleles found in city populations are the results of admixture.  For example, if the two Brazilian tribes we studied were to form a single population, then the number of alleles would almost double and it would require relatively few such amalgamations to bring the number of alleles up to those found in a provincial town of Europe or Asia (The origins of HLA-A, B, C polymorphism. - group of 2 »P Parham, EJ Adams, KL Arnett - Immunol Rev, 1995 - ncbi.nlm.nih.gov, p. 177)
... is unclear to you and Eric?


Um, how 'bout the part where you explain where those new alleles came from in all these indigenous (and later admixed) populations after the Flood? Eric is quite correct -- at least 617 alleles must have emerged (sure, in localized populations if you want) since then. Mutation is the only option (unless God intervened again?). You have been trying to claim this can't happen. Furthermore, you concede that they have been naturally selected for, which denies you the "harmful mutation" escape hatch. Dave, you don't even know what you're arguing anymore.

 
Quote
 
Quote
Phenotypic diversity was never at issue, but genetic diversity most certainly still is. It has to come from somewhere, Dave. Where?
Well then we miscommunicated.  

I have been arguing all along that ...

1) "Dramatic differences" are possible in a very short time, and
2) "Dramatic difference" potential can easily survive a single pair bottleneck simply by inclusion of most common alleles in the pair

I think of "dramatic differences" as "large phenotypic diversity" ... what about you?  I think of "genetic richness" as "high heterozygosity", i.e. inclusion of most common alleles in the bottleneck pair ... how about you?

I thought Eric was trying to refute these two points.

If he (and you) are not ... then Hallelujah!  We agree on something for a change.


That's nice, Dave. Now explain the genetic diversity that is part of the "dramatic differences" we observe among living organisms on this planet (this is what we've been asking). I don't care what they look like -- we're talking DNA, which has its own "dramatic differences" that cannot be explained by recombination (what is there to recombine?). Nobody ever claimed (though you tried to make it seem like they did) that the extreme phenotypic variation in dogs (not to mention other species), selected by centuries of human domestication, is not in large part a result of recombining existing genetic diversity in canids. We've been trying to get you to tell us where you think that existing diversity came from. Hint: there is no way whatsoever that it could ever have been even mostly contained in two individual dog-type-things within the past 10,000 years, no matter how heterozygous you think they were. A simple scan of the genetic diversity present in canids would convince anybody with two brain cells to rub together that it has been a long, long, long time since any canid Adam and Eve (quite likely longer than anything we call canids themselves have been around). If you continue to claim that it hasn't, then either you haven't got a clue about the existing genetic diversity or  you believe in rates of mutation higher than anything I could postulate with a clear head (probably both). Maybe you should have tried cheetahs? At least their genomes show some evidence of a recent bottleneck.

Oh, and if I was to supply you with an actual definition for your "genetic richness", I suppose it would be something along the lines of genetic diversity, a concept I work with and teach in regularly. Genetic diversity (I'm talking within a species) exists at three basic levels: within individuals, within populations, and among populations. (We've also been talking about an even higher level -- that among species and higher taxonomic groups.) Yes, heterozygosity would be a component of genetic diversity/"richness" (i.e., that found within individuals). But just one part, and the only part you can stuff on the Ark. How about polymorphism (i.e., genetic diversity/"richness" within populations)? How about rare alleles and allele frequencies (i.e., genetic diversity/"richness" among populations)? Then we could talk about the importance of genetic diversity (e.g., for conservation) as a source of evolutionary potential and fitness. See Dave, I even do better than you do with invented concepts you pull out of your ass.

 
Quote
     
Quote
The fact remains that you have no objective way of knowing if the created "man" kind initially included chimps (and gorillas and 'rangs).
True, but you also have no objective way of knowing if we share a common ancestor.  Genetics can only give us clues.  We have to turn to other things for more clues.  And to these I have turned.  I am not so myopic or arrogant as to presume that only science can tell us everything there is to know.


That's nice. Neither am I.

 
Quote
Cory, your science training has limited your vision.


In the land of the blind...

 
Quote
You say you reject anything that you cannot prove scientifically,


Oh, REEAAALLLLYYY now? Care to remind me when and where I said I subscribe to such an obvious absurdity? Or are you making things up again? Liar.

 
Quote
yet you uncritically accept the proposition that matter organized itself into biological structures in defiance of the very scientific laws that you applaud.


I do, do I? By matter organizing itself into biological structures, I assume you mean abiogenesis? Or do I uncritically accept the proposition that plants and animals metabolize matter from their surroundings to organize their own structures? Assuming it's the former, please remind me where I have said anything whatsoever regarding my beliefs about the origins of life. You won't find it, so you'll have to make something up. Then you'll have to show me how whatever theory of abiogenesis you ascribe to me violates any "scientific laws that I applaud". Then you'll have to show me that I have accepted this scientific-law-defying-theory-of-abiogenesis-I-never-voiced uncritically. If you can't do that, then you're making shit up again, Dave. Liar.

 
Quote
You accept written eyewitness testimony for many things in your life.


Yep. And reject it for many others. Most recently in a turn in jury duty, for example (much less exciting than it sounds, but I did reject eyewitness testimony). I also reject the eyewitness accounts of flying witches in Salem, Davey. See, I actually incorporate such accounts into a broader field of evidence to see if they coincide. You should try it some time. And in all cases, I know who the professed eyewitness actually was, since this goes a long way toward determining credibility. As you should know better than most, Dave, would-be witnesses LIE. Or make stuff up without even knowing they're doing it.

 
Quote
You just don't regarding the Origin of Species.


The book? Sure I do. My girlfriend gave me an original Sixth Edition in beautiful condition for Christmas (it really is gorgeous). I accept the dealer's account of its provenance. What are you talking about, Dave? Assuming you didn't mean the book, apparently you and I actually both agree on the origin of species -- they emerged from existing biological diversity through mutation, selection, geographical isolation, local adaptation, etc., etc. If you're talking about the origin of kinds, you'll have to tell me what the #### those actually are, how I can recognize them (you know, just so I can be sure they exist before I waste time delving into their origins). You haven't done that. If you're talking about the origin of life, see above, you liar you. That's a topic for another day -- but not with you, Dave, because it involves biochemical concepts you don't have a prayer of understanding within either of our lifetimes.

 
Quote
Alas, maybe you will someday.


You know, in my own way, I pray for you, too, Dave. But if I was to use the melodramatic, "Alas!", it would only be for the kids through which your nonsensical (but well-adapted) memes will be propagated.

  
deadman_932



Posts: 3094
Joined: May 2006

(Permalink) Posted: Jan. 03 2007,13:55   

I realize this is utterly futile, Dave, but I enjoy your squeals. You claim to have ANSWERED the "first 15 " of my questions? Can you NAME the questions you've "answered?"
I'll repost the first 15 I have on MY little list...and I'd like you to at LEAST name the page numbers where you "answered " them...but of course you won't...once again showing how willing you are to make unsupported ( and amusingly false) claims.
A Few Currently Unanswered Questions for Dave
(1) Why can't you provide a means of falsifying your "hypothesis?" This is your job, not that of others.
(2)  You admit you've never seen the supposedly "inerrant" originals of the bible . So-first-how do you know they're "inerrant"? Because the admittedly flawed copies tell you so? And you believe them why? From PuckSR, p.124
(3)  I asked you what was equivocal about the clearly discounted Tyre prophecy, and you all you have done is ignore my questions...for thirty days (from 7_Popes) p.124
(4)  How is the dendrochronology for Catal Huyuk wrong?
(5)  Who do you think had syphilis on the ark?
(6)  If Noah and his little group were the only humans left, can you calculate for me the average number of children each female would have to have in order to achieve the population levels we have today...in 4,356 years??
(7)  How much water was involved in the flood, Dave? Estimate of the amount of water that was underground, and how deep was it? Was it spread uniformly under the crust, or was it in localised (and deep) reservoirs?
(8)  You claim that  humans have been literate since your flood. How come none of them had anything to say about an ice age that froze most of the planet solid? How come there's no independent evidence of it from any written source?
(9)  Identify precisely the source for the "waters of the deep" Dave. point to any geology references that show this "layer of water" existed under the crust.
(10)  Why are there so many profitable companies that use the Old Earth paradigm as the basis for a successful business case?
(11)  Why is there not a single company anywhere in the world that uses your 6000 year old Young Earth paradigm as the basis for a business case?
(12)  How did those tracks get in the coconino sandstone in the midst of a raging flood that deposited billions MORE tons of sediment on top of the sandstone? Sandstone can't "dry" in the middle of a flood that continues to deposit layers under a "water canopy", Dave. Nor would those animals survive UNDERWATER, nor would their tracks survive the pressure of the layers above on the wet sandstone during the "flood year"
(13)  Layers should have SOME animals in them jumbled up *everywhere* dave. There should be dinos with modern rhinos, with deinotheriums and giant sloths, with Devonian amphibians...yet we don't see that. "Hydraulic sorting" won't do, Dave..or claims that mammals are "more mobile"-- this is utter nonsense.
(14)  Why are certain species of animals (fossilized trilobites) found in the lowermost layers, while others of the same approximate size and shape (fossilized clams) can be found at the top layers, even at the top of Mt. Everest? Did the clams outrun the trilobites in the race uphill from the flood waters?
(15)  Fossils of brachiopods and other sessile animals are also present in the Tonto Groupof the Grand Canyon. How could organisms live and build burrows in such rapidly deposited sediments?

Let's see, I count 6 in that group that you haven't even TOUCHED, not even peripherally...and I seem to recall that I just re-asked that Barringer meteor crater AGAIN just recently. So, which DID you answer? And please don't say you "answered" about population growth--when you didn't include any mortality rates...and don't say you "answered" the Coconino sandstone/spider tracks one, or the fossil sequence ones, or the dendrochronology one...I refuted "Dr." Don Batten easily, and you dropped it like a hot rock while pretending you were going to set up a "debate" between he and I? And Dave...YOU SURE NEVER PROVIDED A MEANS OF FALSIFYING YOUR "HYPOTHESIS" that is "better than any other" ...

SO NAME THE PAGES WHERE YOU CLAIM TO HAVE ANSWERED THESE THINGS. BE BOLD, BE BRAVE .

Oh, and Dave, I hope you move to Dawkins' site. I'll be sure ( as a professional courtesy to fellow scientists) to direct them to threads here, which they can peruse for Dave-droppings and sheer hilarity.

--------------
AtBC Award for Thoroughness in the Face of Creationism

  
afdave



Posts: 1621
Joined: April 2006

(Permalink) Posted: Jan. 03 2007,14:34   

Eric ...  
Quote
Dave, do you even bother to read my posts?
Very little.  Sorry.  I've explained why many times.  You want me to read your posts?  Show some honesty, quit misrepresenting me, etc. etc.  It's pretty simple.

Cory ...  
Quote
The book?
No. The true origin of species.

But I do read your posts and I will respond to your latest one manana!  Cheers!  :)

--------------
A DILEMMA FOR THE COMMITTED NATURALIST
A Hi-tech alien spaceship lands on earth ... DESIGNED.
A Hi-tech alien rotary motor found in a cell ... NOT DESIGNED.
http://afdave.wordpress.com/....ess.com

  
Lou FCD



Posts: 5455
Joined: Jan. 2006

(Permalink) Posted: Jan. 03 2007,14:40   

Quote (afdave @ Jan. 03 2007,14:34)
Very little.  Sorry.

Almost 11,000 comments and I believe this is the first honest thing I've seen from you.

--------------
“Why do creationists have such a hard time with commas?

Linky“. ~ Steve Story, Legend

   
afdave



Posts: 1621
Joined: April 2006

(Permalink) Posted: Jan. 03 2007,14:43   

I used to ... back when I saw some honesty and some brainy content.  Just don't see much these days.

--------------
A DILEMMA FOR THE COMMITTED NATURALIST
A Hi-tech alien spaceship lands on earth ... DESIGNED.
A Hi-tech alien rotary motor found in a cell ... NOT DESIGNED.
http://afdave.wordpress.com/....ess.com

  
incorygible



Posts: 374
Joined: Feb. 2006

(Permalink) Posted: Jan. 03 2007,14:46   

Dave, I'm going to help you with deadman's question (1), although you're off to a poor start.

You've given us "evidence" for your kind/flood/Ark hypothesis, in that the vast majority of polymorphic loci within a species have 1-4 alleles. Cool. Maybe your CGH is correct regarding the kinds, the flood and the boat. Don't you want to, you know, find out?

But then you claim:

 
Quote
Are you forgetting that we (creationists) can never definitively demarcate a "kind"?


I'm not forgetting that (how could I?!;), but if you don't mind me asking, why the #### not? You've just given us a perfect baraminological method!

See, all you have to do is draw up phylogenies based on shared polymorhpisms. With a broad enough sample of individuals and loci (the scientific community has plenty available to get you started), it would be pretty easy to get around the uncertainty introduced by some trivial mutations at certain loci (after all, almost all mutation is harmful and selection would have removed the vast majority of "mutant", non-Ark alleles). Take a bunch of species, see if they share a suitably significant proportion of their polymorphic alleles at these "1-4" loci (what determines a significant proportion would be easy to determine by comparison to outgroups -- you guys know stats, right?). If they do -- bingo! -- they're the same kind. If they don't, they're different kinds. Kind-demarcation made easy!

Remember when you showed us that little drawing where you lopped off the top of an evolutionary "tree" to get a little "forest"? Well, here's how you find the forest through the tree, big guy!

Oh sure, there'll be some gray areas in some phylogenies. But that's to be expected, and you could certainly find a few good (and potentially surprising) "kinds" pretty quickly. You guys should be able to outpace those silly molecular phylogenists operating on the ridiculous assumption of continued common descent in no time! Your method will emerge as superior, won't it Dave?

You've shown us all the baraminology groups and workshops. Why haven't they thought of this? It's child's play for any scientist to envision such a study, Dave. (Why must I always be coming up with ways to test and potentially advance your hypothesis, huh?) If they have thought of this (and I can't see why not -- it's sitting right there on AiG, that increasingly popular font of scientific information, waiting to be found by both AiG scientists and any amateur scientist like yourself), why haven't they published any results? Dave, with a little impetus, you could do this! You know where to find the appropriate literature and data by now, right?

They (AiG et al.) do actually believe the stuff they've made you believe, right, Dave? Because really, all you need is this 1-4 original alleles idea and you're golden. Start looking at some phylogenies and you'll be rewriting taxonomy!

Start delineating those kinds, Dave. If your interpretation of the Bible is right -- ####, if it's even close -- you'll have no trouble at all.

Oh, and for your salvation, I really hope the method doesn't show shared polymorphisms between humans and chimps (because you know what that would mean...). After all, we've already noted that this is somewhat observed in the HLA locus -- there are more than 10 alleles that humans have in common with chimps. What if those were the ones on the Ark? Uh oh...

  
thurdl01



Posts: 99
Joined: Mar. 2006

(Permalink) Posted: Jan. 03 2007,14:54   

Quote (afdave @ Jan. 03 2007,14:34)
Show some honesty, quit misrepresenting me, etc. etc.

And once again, as has happened many times in this thread, the pot has called the snow drift black.

And another lurker in the dying hours of this thread popping his head out to thank all of those who tried to get a point across to someone uninterested in hearing that point.  The information has been wonderful, and the fortification of those posting has been commendible.  For awhile, I was against closing this thread, as it granted AFD the martyrdom that he has so sought, but there really has been less and less point to it as the months have dragged on.  Well done, all, and it is somewhat nice to know that this thread is down to just double digit replies left.  I'm glad to do my part in killing one of them.

  
carlsonjok



Posts: 3326
Joined: May 2006

(Permalink) Posted: Jan. 03 2007,14:57   

Let me apologize up front for using up a precious post, now that we are down into double digits.  But, this just tickled me when I read it.

Y'all may recall that Dave was firmly against Representative-elect Keith Ellison swearing the oath of office for the US House on a copy of the Koran.  Well, this little tidbit from today's Washington Post says that Ellison will be taking the oath on Thomas Jefferson's personal copy of the Koran.

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It's natural to be curious about our world, but the scientific method is just one theory about how to best understand it.  We live in a democracy, which means we should treat every theory equally. - Steven Colbert, I Am America (and So Can You!)

  
incorygible



Posts: 374
Joined: Feb. 2006

(Permalink) Posted: Jan. 03 2007,15:02   

Quote (afdave @ Jan. 03 2007,14:34)
Cory ...    
Quote
The book?
No. The true origin of species.

Ah. You threw me with the capitalization and strange use of the term "species". After all, as you just stated on another thread, Creationists share the concept of speciation (i.e., the origin of species) with evolutionists, right? That was you, wasn't it?

Quote
But I do read your posts and I will respond to your latest one manana!  Cheers!  :)


Excellent! I look forward! But there's really not a whole lot to respond to in my reply to your reply. Instead, I'd rather you respond to the post just previous to this one where I offer you a method for delineating created kinds. Hopefully you will be as excited about it as I am.

And psst...Dave...look, obviously the atheist evolutionist establishment wouldn't look too kindly on me blithely offering up this secret info on a research project that will lead to its rapid demise and the long-sought rise of Creation Science. They've been secretly guarding the concept of experimental design for so long, and now I've gone and let you guys in on it. What's worse, you now have an-honest-to-goodness Bible-based scientific study that is cheap and easy -- you can conduct it in some secret location of your choosing (anywhere with access to the internet will do), with no need for applying to the atheist-controlled funding bodies. Plus, it's so well-matched to scriptural Truth that your results will be unequivocal (i.e., even the atheist-controlled journals like Science and Nature will have to publish your results, or be left behind, so to speak). And do I have to remind you that you're about to have a lot more time on your hands? Fuck, if they ever found out about this, I'd be Sternberged in no time. So let's just keep this between you and me, eh? (I'm not worried about the other plebes on this board -- Eric doesn't have the educational background to understand these basic genetic concepts that you've mastered in such a short time, and the rest won't even notice what I say -- they'll just nod their heads at another presumably propaganda-filled post from a fellow evolutionist.) You can have all the glory. Just tap the side of your nose when you receive your Nobel (soon to be renamed Noah) Prize and I'll know you're thinking of this little birdie, eh big guy?

  
ericmurphy



Posts: 2460
Joined: Oct. 2005

(Permalink) Posted: Jan. 03 2007,15:51   

Quote (afdave @ Jan. 03 2007,12:34)
Eric ...      
Quote
Dave, do you even bother to read my posts?
Very little.  Sorry.  I've explained why many times.  You want me to read your posts?  Show some honesty, quit misrepresenting me, etc. etc.  It's pretty simple.

Good luck trying to find somewhere I haven't been totally, 100% honest, Dave. Go ahead, give it a try. There's absolutely no reason why I would need to be otherwise. What, you think your arguments are difficult to demolish? Guess again.

In the meantime, your own dishonesty on this thread has been sufficiently documented to where I don't think anything remains to be said about it which hasn't already been said.

But explain to me, if you possibly can, how you can think you've taught me anything about how many alleles a single diploid organism can have for a given gene, when I've been pointing out the same thing to you for over a month.

If actually had read some of my posts, you would have dropped all of your arguments and your young-earth creationism a long time ago.

--------------
2006 MVD award for most dogged defense of scientific sanity

"Atheism is a religion the same way NOT collecting stamps is a hobby." —Scott Adams

  
afdave



Posts: 1621
Joined: April 2006

(Permalink) Posted: Jan. 03 2007,15:52   

Why are so many people worried about the "few precious posts" left on this thread?  Is there some secret plan to cut my fingers off also at Post #5000 or something?  Or do you guys' computers block the Dawkins forum IP address?  Or my blog's IP address?

--------------
A DILEMMA FOR THE COMMITTED NATURALIST
A Hi-tech alien spaceship lands on earth ... DESIGNED.
A Hi-tech alien rotary motor found in a cell ... NOT DESIGNED.
http://afdave.wordpress.com/....ess.com

  
ericmurphy



Posts: 2460
Joined: Oct. 2005

(Permalink) Posted: Jan. 03 2007,15:57   

Quote (afdave @ Jan. 03 2007,12:43)
I used to ... back when I saw some honesty and some brainy content.  Just don't see much these days.

Kudos for the hypocrisy, Dave. Again, I invite you to scour this thread and your other thread for a single example of dishonesty on my part.

Good luck. You'll need it.

In the meantime, I think it's pretty obvious who has been demolishing whose arguments, Dave. And it ain't you who's been doing the demolishing.

Because what you do see in my posts, whether you'll admit it or not, is unanswerable question after unanswerable question after unanswerable question.

--------------
2006 MVD award for most dogged defense of scientific sanity

"Atheism is a religion the same way NOT collecting stamps is a hobby." —Scott Adams

  
deadman_932



Posts: 3094
Joined: May 2006

(Permalink) Posted: Jan. 03 2007,15:59   

You're still whining and not dealing with what was asked you, Dave. Why don't you just ooze your way on over to Dawkins' place now? Then show your daddy and your kids and your wife and the rest of your family this thread.

Oh, and I LOVE the way you claimed that ALL the "friends" you told about your threads here...just "didn't have the time" to post on 'em...in well over 6 months.

DAY-UM, they's some BUSY folks not to have 3 minutes to spare to give you support, Davey--for over six months.

Or maybe you're just lying again.

--------------
AtBC Award for Thoroughness in the Face of Creationism

  
incorygible



Posts: 374
Joined: Feb. 2006

(Permalink) Posted: Jan. 03 2007,16:02   

Quote (afdave @ Jan. 03 2007,15:52)
Why are so many people worried about the "few precious posts" left on this thread?  Is there some secret plan to cut my fingers off also at Post #5000 or something?  Or do you guys' computers block the Dawkins forum IP address?  Or my blog's IP address?

That's when we blow cover and bring out God's body, Dave. You see, Nietzsche was right (no big revelation -- the carcass had been stinking up his basement for ages before he got around to noticing). Last I checked, Richardthughes was using it as an ironic guitar stand for his Tele.

That, or perhaps nobody is all that concerned with tracking you down on your future adventures in cyberspace.

But I'll be anxiously awaiting your new baraminology, all the same.

  
improvius



Posts: 807
Joined: Jan. 2006

(Permalink) Posted: Jan. 03 2007,16:07   

Quote (afdave @ Jan. 03 2007,16:52)
Why are so many people worried about the "few precious posts" left on this thread?  Is there some secret plan to cut my fingers off also at Post #5000 or something?  Or do you guys' computers block the Dawkins forum IP address?  Or my blog's IP address?

This is the end of your magnum opus, Dave.  It's what you will be remebered for - a grand monument to the ridiculousness and intractability of creationists everywhere.  Some of us just think it's a shame that we can't pack it with even more of your absurd musings.  It even pains me to add this post, knowing that I'm taking away another opportunity for you to say something incredibly stupid.  Oh sure, you'll keep saying stupid things in other places.  But it just won't be the same.

I'm still hoping you respond to the dogs and foxes/baraminology thing.  Because I just know that's going to be fantastically stupid.

--------------
Quote (afdave @ Oct. 02 2006,18:37)
Many Jews were in comfortable oblivion about Hitler ... until it was too late.
Many scientists will persist in comfortable oblivion about their Creator ... until it is too late.

  
Wesley R. Elsberry



Posts: 4991
Joined: May 2002

(Permalink) Posted: Jan. 03 2007,16:34   

Quote

A LITTLE CLOSER LOOK AT WESLEY'S PIECE

Wesley ...      
Quote
Recombination

We have already introduced the term recombination. This term is widely used in many areas of practical and theoretical genetics, so it is absolutely necessary to be clear on its meaning at this stage. Recombination can occur in a variety of situations in addition to meiosis, but for the present we define it in relation to meiosis. To adapt the definition to other situations, we shall simply replace the words meiotic and meiosis with other appropriate terms.

Definition

Meiotic recombination is any meiotic process that generates a haploid product of meiosis whose genotype is different from the two haploid genotypes that constituted the meiotic diploid. The product of meiosis so generated is called a recombinant.


-- Suzuki, Griffiths, & Lewontin, 1981, Introduction to Genetic Analysis (2nd edition), p.140.


A good definition.  But other sources highlight something very important to the present debate ...      

 
Quote
Recombination therefore only shuffles already existing genetic variation and does not create new variation at the involved loci.
http://en.wikipedia.org/wiki/Genetic_recombination


Wesley ...      
Quote
Those meiotic processes mentioned include crossover and inversion. A little reflection should be sufficient to convince anyone able to understand genetic mechanisms that any genotype that can be generated by the application of a point mutation can also theoretically be produced by one or more recombination events in the presence of sufficient base-pair diversity. Recombination also does not respect reading frame boundaries, so recombination is (as implied above) fully able to produce novel alleles, and is not restricted to shuffling novelty produced solely by other mechanisms. Recombination is, further, a far more common event than point mutation. Noting that one mechanism of generating novel genotypes is more common than another seems to me quite sufficient reason to write in a way that treats those processes as distinct.


Notice that word 'theoretically.'  It is the key word in the whole paragraph.  This word sums up Darwinism quite nicely.  What Wesley is saying is that RECOMBINATION and MUTATION are both THEORETICALLY capable of creating all life on earth, so making a distinction between them as mechanisms is nit-picky.  I disagree.  I am into EVIDENCE, not theory.  Isn't that what scientists (even amateur ones like me) are supposed to be into?  And the EVIDENCE says that "recombination does not create new variation", Darwinist wishful thinking notwithstanding.


The Wikipedia article is in error on this point. I've entered a comment in the talk page there with a verifiable reference, so I expect that it will change shortly.

The Wikipedia entry is not evidence, by the way. Nature's review of encyclopedias found that in technical articles of moderate length, domain experts found, on average, four errors within Wikipedia articles. (Encyclopedia Britannica did only modestly better, with an average of three errors per such article.) In this case, the statement in the Wikipedia article was unreferenced. In contrast, I provided reference to a research article seeking to characterize the mechanism of genetic novelty, finding that recombination accounted for the events under study and not an alternate mechanism of polymerase slippage.

 
Quote

     
Quote
Seizing upon pedanticism to escape the inevitable observation that genetic variation, however it arises, is sufficient to give selection its needed scope seems to me to be a rather desperate and pathetic strategy.


I am not seizing upon pedanticism.  I am refuting ATBC notions that 1) bottlenecks necessarily kill diversity, and 2) 4500 years (the time since the global flood) is too short to achieve massive diversity.


I doubt that there has been any "rebuttal" on either. Handwaving, sure. Rebuttal, no.

 
Quote

     
Quote
As for the proposed rapid diversification needed to fit an evolutionary time-scale that includes a global flood about 4K years ago, the example of dog breeds doesn't satisfy this. A conspicous lack of diversification of dental formula is seen among dog breeds; no matter what breed you look at, it has the usual canine dental formula. Since mammalian paleontology is based primarily upon dental characters, and one would need to explain how so many various mammalian dental formulas diversified in the limited period of post-flood time, it appears that the example of dog breeds goes primarily to establishing that longer time periods are needed for acquiring the observed diversity in this set of characters.


I am not trying to fit anything into an evolutionary time-scale.  I have been REFUTING the evolutionary Deep Time scenario.  The present debate has nothing to do with dog teeth.  It has everything to do with 1) population bottlenecks, and 2) time needed for diversification


Read for comprehension, please: "an evolutionary time-scale that includes a global flood about 4K years ago". You are proposing that observed genetic diversity can be accounted for by evolutionary processes since Noah's flood. That is an "evolutionary time-scale".

You said that domestic dog breeds demonstrate that divergence of characters occurs on the reduced time-scale that you require. However, you do not account for mammalian divergence of dental formulae with this example. Mammals have all sorts of different dental formulas, many of which would have to arise since Noah's flood, within your reduced evolutionary time-scale. So on the one hand we have the observation that many changes in mammalian dental formulae have happened, and on the other we have your example of domestic dogs, which shows no change in dental formula whatsoever. Your example does not support the notion that observed mammalian diversity in dental formula can be compressed into the evolutionary time-scale of divergence since a Noachic flood.

Get it now?

Edited by Wesley R. Elsberry on Jan. 03 2007,16:39

--------------
"You can't teach an old dogma new tricks." - Dorothy Parker

    
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