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Kattarina98



Posts: 1267
Joined: Sep. 2009

(Permalink) Posted: April 07 2013,09:39   

Double post deleted.

Edited by Kattarina98 on April 07 2013,16:41

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Barry Arrington is a bitch.

  
Kattarina98



Posts: 1267
Joined: Sep. 2009

(Permalink) Posted: April 07 2013,09:40   

Quote (Occam's Aftershave @ April 07 2013,15:36)
Quote (Freddie @ April 07 2013,05:27)
From joeys blog:
       
Quote
I also understand trees. Over 30 years working in information technology designing network topologies, computer directory trees and server access trees. All of that requires knowledge of trees, hierarchies and nested hierarchies.

Is this a new claim about his past life experience, or one we've heard before - i've lost track of them all.  

LOL!  Compulsive liar Joe Gallien invents yet another career for himself.  Now he's a 30 year IT guy.  Before that he was a biological research scientist, before that he was a GA expert who specialized in cryptology.  All that while still finding the time to be a full time toaster repairman.

Andy, you should ask Joe about his belief that the Egyptian pyramids are really giant antennas designed to contact space aliens and that reincarnation is real.  He's all about the science you know.   :D

Plus Stonehenge was built by aliens from Outer Space, as are crop circles, and dinosaurs are still around.

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Barry Arrington is a bitch.

  
Soapy Sam



Posts: 659
Joined: Jan. 2012

(Permalink) Posted: April 07 2013,10:07   

Quote (midwifetoad @ April 05 2013,21:33)
Might as well post this gem from Denton (pre Destiny Denton)

   
Quote
There is another stringent condition which must be satisfied if a hierarchic pattern is to result as the end product of an evolutionary process: no ancestral forms can be permitted to survive. This can be seen by examining the tree diagram on page 135. If any of the ancestors X, Y, or Z, or if any of the hypothetical transitional connecting species stationed on the main branches of the tree, had survived and had therefore to be included in the classification scheme, the distinctness of the divisions would be blurred by intermediate or partially inclusive classes and what remained of the hierarchic pattern would be highly disordered.- Denton, “Evolution: A Theory in Crisis” page 136 (X, Y and Z are hypothetical parental node populations)

Hmmm. Denton (and Joe) might wish to consider a ... well, an actual tree. The hierarchic pattern is compromised by the continued existence of the supporting structure? Really?

If we had the living genome of every organism descended from a given individual, even with no knowledge of who begat who, we would have a 'more hierarchic' picture than if we only had a sample (modern descendants). We could build, like a tomograph, a set of historic slices, each the then-current equivalent of the modern 'slice' that we get from looking at modern genomes. Stack 'em together and what have you got (bibbety bobbety boo) ... much greater resolution of ambiguities due to homoplasy, LGT, deletion, saturation etc: a closer approach to the 'real' tree.

--------------
SoapySam is a pathetic asswiper. Joe G

BTW, when you make little jabs like “I thought basic logic was one thing UDers could handle,” you come off looking especially silly when you turn out to be wrong. - Barry Arrington

  
Andy Schueler



Posts: 43
Joined: April 2013

(Permalink) Posted: April 07 2013,17:06   

Quote (Soapy Sam @ April 07 2013,10:07)
Quote (midwifetoad @ April 05 2013,21:33)
Might as well post this gem from Denton (pre Destiny Denton)

     
Quote
There is another stringent condition which must be satisfied if a hierarchic pattern is to result as the end product of an evolutionary process: no ancestral forms can be permitted to survive. This can be seen by examining the tree diagram on page 135. If any of the ancestors X, Y, or Z, or if any of the hypothetical transitional connecting species stationed on the main branches of the tree, had survived and had therefore to be included in the classification scheme, the distinctness of the divisions would be blurred by intermediate or partially inclusive classes and what remained of the hierarchic pattern would be highly disordered.- Denton, “Evolution: A Theory in Crisis” page 136 (X, Y and Z are hypothetical parental node populations)

Hmmm. Denton (and Joe) might wish to consider a ... well, an actual tree. The hierarchic pattern is compromised by the continued existence of the supporting structure? Really?

If we had the living genome of every organism descended from a given individual, even with no knowledge of who begat who, we would have a 'more hierarchic' picture than if we only had a sample (modern descendants). We could build, like a tomograph, a set of historic slices, each the then-current equivalent of the modern 'slice' that we get from looking at modern genomes. Stack 'em together and what have you got (bibbety bobbety boo) ... much greater resolution of ambiguities due to homoplasy, LGT, deletion, saturation etc: a closer approach to the 'real' tree.

This was from Evolution: A theory in crisis, which Denton wrote while he clearly had no clue what he was talking about, this was before he was educated on how to actually read a phylogenetic tree - http://www.antievolution.org/people....ce.html

I think the reason why Joe G. quoted Denton is that he got desperate, he (might have) realized that his claim that transitional forms ruin a nested hierarchy was nonsense (although he still seems to be confused about the fact that transitional forms show transtions between ancestral species and their descendants).
So he shifted the goalposts from "transitional forms ruin a nested hierarchy" to "if all transitional forms *were still alive*, they would ruin a hierarchical classification". The latter claim is actually true (as Darwin already noted in chapter 14 of the Origin - what creates objective criteria to distinguish different groups of extant organisms is extinction and if all ancestral species were still alive, there would be only one meaningful classification, ONE group that includes all life). But since organisms are not immortal, this is nothing but a thought experiment and completely and utterly irrelevant for the point he tried to make initinally.

  
Cubist



Posts: 558
Joined: Oct. 2007

(Permalink) Posted: April 07 2013,17:31   

Quote (Andy Schueler @ April 07 2013,17:06)

…he shifted the goalposts from "transitional forms ruin a nested hierarchy" to "if all transitional forms *were still alive*, they would ruin a hierarchical classification". The latter claim is actually true (as Darwin already noted in chapter 14 of the Origin…

Disagreement. If all organisms were immortal, it would still be possible to reconstruct a hierarchial classification, provided that we had some way of determining the age of any given organism. Given immortal organisms with known ages, we could ask questions like "how come thus-and-such feature is only found in organisms that were born between X and (X+Y) years ago?". and reconstruct the heirarchy on the basis of the answers to those questions.

  
Soapy Sam



Posts: 659
Joined: Jan. 2012

(Permalink) Posted: April 07 2013,18:10   

Quote (Andy Schueler @ April 07 2013,23:06)
       
Quote (Soapy Sam @ April 07 2013,10:07)
       
Quote (midwifetoad @ April 05 2013,21:33)
Might as well post this gem from Denton (pre Destiny Denton)

             
Quote
There is another stringent condition which must be satisfied if a hierarchic pattern is to result as the end product of an evolutionary process: no ancestral forms can be permitted to survive. This can be seen by examining the tree diagram on page 135. If any of the ancestors X, Y, or Z, or if any of the hypothetical transitional connecting species stationed on the main branches of the tree, had survived and had therefore to be included in the classification scheme, the distinctness of the divisions would be blurred by intermediate or partially inclusive classes and what remained of the hierarchic pattern would be highly disordered.- Denton, “Evolution: A Theory in Crisis” page 136 (X, Y and Z are hypothetical parental node populations)

Hmmm. Denton (and Joe) might wish to consider a ... well, an actual tree. The hierarchic pattern is compromised by the continued existence of the supporting structure? Really?

If we had the living genome of every organism descended from a given individual, even with no knowledge of who begat who, we would have a 'more hierarchic' picture than if we only had a sample (modern descendants). We could build, like a tomograph, a set of historic slices, each the then-current equivalent of the modern 'slice' that we get from looking at modern genomes. Stack 'em together and what have you got (bibbety bobbety boo) ... much greater resolution of ambiguities due to homoplasy, LGT, deletion, saturation etc: a closer approach to the 'real' tree.

This was from Evolution: A theory in crisis, which Denton wrote while he clearly had no clue what he was talking about, this was before he was educated on how to actually read a phylogenetic tree - http://www.antievolution.org/people.....ce.html

I think the reason why Joe G. quoted Denton is that he got desperate, he (might have) realized that his claim that transitional forms ruin a nested hierarchy was nonsense (although he still seems to be confused about the fact that transitional forms show transtions between ancestral species and their descendants).
So he shifted the goalposts from "transitional forms ruin a nested hierarchy" to "if all transitional forms *were still alive*, they would ruin a hierarchical classification". The latter claim is actually true (as Darwin already noted in chapter 14 of the Origin - what creates objective criteria to distinguish different groups of extant organisms is extinction and if all ancestral species were still alive, there would be only one meaningful classification, ONE group that includes all life). But since organisms are not immortal, this is nothing but a thought experiment and completely and utterly irrelevant for the point he tried to make initinally.


Does it need extinction? If one took a master copy of a document and created separate copying lines with branching, with distinctive 'inherited' marks that appeared during the process, a classification scheme based upon those marks could be entirely hierarchic even if you included every copy in the dataset, and none were lost, so long as you didn't assume they were all leaves.

(I'm not going to lay $10,000 out on it though! :) Perhaps I am confusing the role of digital characters with 'analogue' ones? On the latter, a fossil record rich in transitionals would present them as 'still alive' in the 'where-to-put-'em' classificatory sense).

--------------
SoapySam is a pathetic asswiper. Joe G

BTW, when you make little jabs like “I thought basic logic was one thing UDers could handle,” you come off looking especially silly when you turn out to be wrong. - Barry Arrington

  
Andy Schueler



Posts: 43
Joined: April 2013

(Permalink) Posted: April 08 2013,06:24   

Quote (Cubist @ April 07 2013,17:31)
Quote (Andy Schueler @ April 07 2013,17:06)

…he shifted the goalposts from "transitional forms ruin a nested hierarchy" to "if all transitional forms *were still alive*, they would ruin a hierarchical classification". The latter claim is actually true (as Darwin already noted in chapter 14 of the Origin…

Disagreement. If all organisms were immortal, it would still be possible to reconstruct a hierarchial classification, provided that we had some way of determining the age of any given organism. Given immortal organisms with known ages, we could ask questions like "how come thus-and-such feature is only found in organisms that were born between X and (X+Y) years ago?". and reconstruct the heirarchy on the basis of the answers to those questions.

True, if it would be possible to assign an age to those hypothetical immortal organisms, then we could just classify the subset of all organisms that emerged within the last century or so.

  
Andy Schueler



Posts: 43
Joined: April 2013

(Permalink) Posted: April 08 2013,06:37   

Quote (Soapy Sam @ April 07 2013,18:10)
Quote (Andy Schueler @ April 07 2013,23:06)
       
Quote (Soapy Sam @ April 07 2013,10:07)
         
Quote (midwifetoad @ April 05 2013,21:33)
Might as well post this gem from Denton (pre Destiny Denton)

               
Quote
There is another stringent condition which must be satisfied if a hierarchic pattern is to result as the end product of an evolutionary process: no ancestral forms can be permitted to survive. This can be seen by examining the tree diagram on page 135. If any of the ancestors X, Y, or Z, or if any of the hypothetical transitional connecting species stationed on the main branches of the tree, had survived and had therefore to be included in the classification scheme, the distinctness of the divisions would be blurred by intermediate or partially inclusive classes and what remained of the hierarchic pattern would be highly disordered.- Denton, “Evolution: A Theory in Crisis” page 136 (X, Y and Z are hypothetical parental node populations)

Hmmm. Denton (and Joe) might wish to consider a ... well, an actual tree. The hierarchic pattern is compromised by the continued existence of the supporting structure? Really?

If we had the living genome of every organism descended from a given individual, even with no knowledge of who begat who, we would have a 'more hierarchic' picture than if we only had a sample (modern descendants). We could build, like a tomograph, a set of historic slices, each the then-current equivalent of the modern 'slice' that we get from looking at modern genomes. Stack 'em together and what have you got (bibbety bobbety boo) ... much greater resolution of ambiguities due to homoplasy, LGT, deletion, saturation etc: a closer approach to the 'real' tree.

This was from Evolution: A theory in crisis, which Denton wrote while he clearly had no clue what he was talking about, this was before he was educated on how to actually read a phylogenetic tree - http://www.antievolution.org/people.....ce.html

I think the reason why Joe G. quoted Denton is that he got desperate, he (might have) realized that his claim that transitional forms ruin a nested hierarchy was nonsense (although he still seems to be confused about the fact that transitional forms show transtions between ancestral species and their descendants).
So he shifted the goalposts from "transitional forms ruin a nested hierarchy" to "if all transitional forms *were still alive*, they would ruin a hierarchical classification". The latter claim is actually true (as Darwin already noted in chapter 14 of the Origin - what creates objective criteria to distinguish different groups of extant organisms is extinction and if all ancestral species were still alive, there would be only one meaningful classification, ONE group that includes all life). But since organisms are not immortal, this is nothing but a thought experiment and completely and utterly irrelevant for the point he tried to make initinally.


Does it need extinction? If one took a master copy of a document and created separate copying lines with branching, with distinctive 'inherited' marks that appeared during the process, a classification scheme based upon those marks could be entirely hierarchic even if you included every copy in the dataset, and none were lost, so long as you didn't assume they were all leaves.

(I'm not going to lay $10,000 out on it though! :) Perhaps I am confusing the role of digital characters with 'analogue' ones? On the latter, a fossil record rich in transitionals would present them as 'still alive' in the 'where-to-put-'em' classificatory sense).

That is also true. Descent from a common ancestor with gradual modification necessarily produces a nested hierarchy.
But what would no longer be possible if all intermediate forms were still around (or would be revived) is the ability to assign extant organisms (or the most recent generation of organisms in a thought experiment were extinction is impossible) *objectively* to different groups.
Groupings like "primates" or "rodents" for example would be completely arbitrary if all intermediate forms were still around. No matter how you would define a group, there would always be a very closely related form that you could not objectively exclude from this group - so you would end up with just *one* group that includes all life. What creates these "boundaries" between groups is lineages going extinct ;-).

  
Zachriel



Posts: 2723
Joined: Sep. 2006

(Permalink) Posted: April 08 2013,07:21   

Quote (Andy Schueler @ April 08 2013,06:37)
{snip}

so you would end up with just *one* group that includes all life. What creates these "boundaries" between groups is lineages going extinct ;-).

You wouldn't be able to use standard classification, but there would still be groupings. Some organisms would clearly have mammaries and three ossicles. Others would clearly have feathers and a furcula. This is true even if some organisms have proto-feathers or quasi-mammaries. What would happen is that the boundaries of sets would be indistinct, however, the general outline would still be discernible. That situation already exists for some taxa. From the correlations of the various traits, it would still be possible to determine common descent.

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You never step on the same tard twice—for it's not the same tard and you're not the same person.

   
Andy Schueler



Posts: 43
Joined: April 2013

(Permalink) Posted: April 08 2013,10:09   

Quote (Zachriel @ April 08 2013,07:21)

Quote
You wouldn't be able to use standard classification, but there would still be groupings. Some organisms would clearly have mammaries and three ossicles. Others would clearly have feathers and a furcula. This is true even if some organisms have proto-feathers or quasi-mammaries. What would happen is that the boundaries of sets would be indistinct, however, the general outline would still be discernible. That situation already exists for some taxa. From the correlations of the various traits, it would still be possible to determine common descent.

Agreed, one could still infer relationships and common descent from the correlation of traits. But, as you say, the boundaries between groups would become blurred.
I´d say that this would lead to a situation where one could no longer objectively demarcate any specific group from it´s closest relatives, so that the only objective grouping that remains would be one that includes all life (but one could of course still arrange taxa within this one group based on correlations of traits).

  
midwifetoad



Posts: 4003
Joined: Mar. 2008

(Permalink) Posted: April 08 2013,10:21   

I don't see the problem. We can make nested hierarchies
from DNA with human families, even when three are for generations are alive.

At what point does this break down? Or am I missing something?

--------------
Any version of ID consistent with all the evidence is indistinguishable from evolution.

  
Andy Schueler



Posts: 43
Joined: April 2013

(Permalink) Posted: April 08 2013,11:27   

Quote (midwifetoad @ April 08 2013,10:21)
I don't see the problem. We can make nested hierarchies
from DNA with human families, even when three are for generations are alive.

At what point does this break down? Or am I missing something?

There would still be a nested hierarchy within this thought experiment (although we might no longer be able to figure out how it looks like) so it is completely irrelevant for the point Joe G. tried to make in any case.
What would be different though, if all intermediate forms would still be around, is that the distinctions between the groupings we now use would become blurred.
You could still infer relationships (and infer that common descent is true) and arrange taxa by correlations of traits. But you could not pick a subset of taxa, assign it to a higher level classification, and claim that you have defined an objective group - no matter how you would try to assign taxa to groups, there would always be a very closely related form to members of your group that you could not objectively leave out.  


Darwin phrased it like this:
Quote
Extinction, as we have seen in the fourth chapter, has played an important part in defining and widening the intervals between the several groups in each class. We may thus account for the distinctness of whole classes from each other--for instance, of birds from all other vertebrate animals--by the belief that many ancient forms of life have been utterly lost, through which the early progenitors of birds were formerly connected with the early progenitors of the other and at that time less differentiated vertebrate classes. There has been much less extinction of the forms of life which once connected fishes with Batrachians. There has been still less within some whole classes, for instance the Crustacea, for here the most wonderfully diverse forms are still linked together by a long and only partially broken chain of affinities. Extinction has only defined the groups: it has by no means made them; for if every form which has ever lived on this earth were suddenly to reappear, though it would be quite impossible to give definitions by which each group could be distinguished, still a natural classification, or at least a natural arrangement, would be possible. We shall see this by turning to the diagram: the letters, A to L, may represent eleven Silurian genera, some of which have produced large groups of modified descendants, with every link in each branch and sub-branch still alive; and the links not greater than those between existing varieties. In this case it would be quite impossible to give definitions by which the several members of the several groups could be distinguished from their more immediate parents and descendants. Yet the arrangement in the diagram would still hold good and would be natural; for, on the principle of inheritance, all the forms descended, for instance from A, would have something in common. In a tree we can distinguish this or that branch, though at the actual fork the two unite and blend together. We could not, as I have said, define the several groups; but we could pick out types, or forms, representing most of the characters of each group, whether large or small, and thus give a general idea of the value of the differences between them. This is what we should be driven to, if we were ever to succeed in collecting all the forms in any one class which have lived throughout all time and space. Assuredly we shall never succeed in making so perfect a collection: nevertheless, in certain classes, we are tending toward this end; and Milne Edwards has lately insisted, in an able paper, on the high importance of looking to types, whether or not we can separate and define the groups to which such types belong.

The diagram he referred to is this one:
http://listoffigures.files.wordpress.com/2010....ife.jpg

  
midwifetoad



Posts: 4003
Joined: Mar. 2008

(Permalink) Posted: April 08 2013,12:08   

OK, but one could do a thought experiment in which all organisms are immortal. We would lose the ability to have convenient names for groups, but we could still classify everyone by degree of kinship.

It seems to me that the critical thing is the ability to trace ancestry. I don't see how that is impaired if the ancestors are still alive. We can still draw a tree.

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Any version of ID consistent with all the evidence is indistinguishable from evolution.

  
Kattarina98



Posts: 1267
Joined: Sep. 2009

(Permalink) Posted: April 08 2013,12:33   

Quote (midwifetoad @ April 08 2013,19:08)
OK, but one could do a thought experiment in which all organisms are immortal. We would lose the ability to have convenient names for groups, but we could still classify everyone by degree of kinship.

It seems to me that the critical thing is the ability to trace ancestry. I don't see how that is impaired if the ancestors are still alive. We can still draw a tree.

I'm not the sharpest tool in the drawer wrt cladistics, but wouldn't the decision of defining clades for critters become arbitrary?

--------------
Barry Arrington is a bitch.

  
OgreMkV



Posts: 3668
Joined: Oct. 2009

(Permalink) Posted: April 08 2013,12:45   

If we assume that all organisms are immortal and that new organisms can be born, then (theoretically) we could run a DNA sequence on every organism and construct a cladogram that way.

It would still tend to form nested hierarchies.  For example, the genes for feathers only exist in dinosauria.  So, any organism with the gene for feathers would exist within dinosauria.  The gene that produces the wide flat bills of ducks and related species would only exist within the group of dinosauria that have feathers.  Etc.

The duck-billed dinosaurs would presumably have a different gene set that results in the duck-bill shaped beak.

Sure, there will be edge cases.  Of course, there are edge cases now.  Ligers and Tions are hybrids between species and they are genetically viable and capable of having offspring.

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Ignored by those who can't provide evidence for their claims.

http://skepticink.com/smilodo....retreat

   
Andy Schueler



Posts: 43
Joined: April 2013

(Permalink) Posted: April 08 2013,12:46   

Quote (midwifetoad @ April 08 2013,12:08)
OK, but one could do a thought experiment in which all organisms are immortal. We would lose the ability to have convenient names for groups, but we could still classify everyone by degree of kinship.

It seems to me that the critical thing is the ability to trace ancestry. I don't see how that is impaired if the ancestors are still alive. We can still draw a tree.

Quote
OK, but one could do a thought experiment in which all organisms are immortal. We would lose the ability to have convenient names for groups, but we could still classify everyone by degree of kinship.

Absolutely!

Quote
It seems to me that the critical thing is the ability to trace ancestry. I don't see how that is impaired if the ancestors are still alive. We can still draw a tree.

Yes, and such a tree would still be natural and useful. The only thing that would change really, is that we could no longer objectively define groupings, because all intermediate forms connecting two sister groups that we currently have, would still be around - a smooth continuum of forms connecting both groupings and no way to define both groups in such a way that all of those forms could be objectively assigned to one of the two (a problem that we already do have sometimes, but in this thought experiment it would be an ubiquitous phenomenon).
But even then we could, as Darwin noted, pick out types that are representative for a large group of related forms and thus give a general idea of the differences between groups, although we could not tell precisely where one group ends and another begins (a form of the sorites paradox).

  
Andy Schueler



Posts: 43
Joined: April 2013

(Permalink) Posted: April 08 2013,12:55   

And the most important consequence of this thought experiment would of course be similar to what would have happened if Genesis would be literally true, and Adam & Eve would have obeyed God, as shown in the end of this hilarious video by DarkMatter2525:
http://www.youtube.com/watch?v....RjR_AHY
:-)

  
midwifetoad



Posts: 4003
Joined: Mar. 2008

(Permalink) Posted: April 08 2013,13:06   

Quote (Kattarina98 @ April 08 2013,12:33)
Quote (midwifetoad @ April 08 2013,19:08)
OK, but one could do a thought experiment in which all organisms are immortal. We would lose the ability to have convenient names for groups, but we could still classify everyone by degree of kinship.

It seems to me that the critical thing is the ability to trace ancestry. I don't see how that is impaired if the ancestors are still alive. We can still draw a tree.

I'm not the sharpest tool in the drawer wrt cladistics, but wouldn't the decision of defining clades for critters become arbitrary?

Someone on another site coined the phrase "quantizing a continuum."

I think in a world of immortals, grouping would be impossible except by descent. One could point to an individual organism and all its descendants. But you would be hard pressed to draw a line between types.

Perhaps I'm missing something, but that's how I think about evolution. In my imagination, everything is still alive, and there are no groups. Everything is a cousin of everything else. There are no intermediates. Just ancestors and descendants.

I think of classifications as useful fictions, like named colors. They are not real, They are an artifact of perception.





--------------
Any version of ID consistent with all the evidence is indistinguishable from evolution.

  
Zachriel



Posts: 2723
Joined: Sep. 2006

(Permalink) Posted: April 08 2013,13:06   

Quote (Andy Schueler @ April 08 2013,12:46)
Yes, and such a tree would still be natural and useful. The only thing that would change really, is that we could no longer objectively define groupings, because all intermediate forms connecting two sister groups that we currently have, would still be around - a smooth continuum of forms connecting both groupings and no way to define both groups in such a way that all of those forms could be objectively assigned to one of the two (a problem that we already do have sometimes, but in this thought experiment it would be an ubiquitous phenomenon).

We could objectively define groups, but not unambiguously define groups. We could, for instance, group organisms with feathers. Some organisms would certainly be within the group, some would certainly be outside the group, and then there are those in-betweens. We might define the edge arbitrarily (what use is half a feather); or instead of using strict sets, use fuzzy sets (featherishness).

Saying it's not objective seems to be like saying there is no ocean because the edge is fuzzy (tide zone).

--------------

You never step on the same tard twice—for it's not the same tard and you're not the same person.

   
Andy Schueler



Posts: 43
Joined: April 2013

(Permalink) Posted: April 08 2013,13:27   

Quote (Zachriel @ April 08 2013,13:06)
Quote (Andy Schueler @ April 08 2013,12:46)
Yes, and such a tree would still be natural and useful. The only thing that would change really, is that we could no longer objectively define groupings, because all intermediate forms connecting two sister groups that we currently have, would still be around - a smooth continuum of forms connecting both groupings and no way to define both groups in such a way that all of those forms could be objectively assigned to one of the two (a problem that we already do have sometimes, but in this thought experiment it would be an ubiquitous phenomenon).

We could objectively define groups, but not unambiguously define groups. We could, for instance, group organisms with feathers. Some organisms would certainly be within the group, some would certainly be outside the group, and then there are those in-betweens. We might define the edge arbitrarily (what use is half a feather); or instead of using strict sets, use fuzzy sets (featherishness).

Saying it's not objective seems to be like saying there is no ocean because the edge is fuzzy (tide zone).

Yeah, it´s a form of the soristes paradox - we can´t point objectively to a precise point in time where day turns into night but that doesn´t necessarily mean that "day" and "night" are not meaningful categories.

For a thought experiment where all intermediate forms would still be around, I would agree that there are still meaningful (pragmatically useful) groupings. But I´d also say that these groupings can no longer be defined *objectively*. Since all intermediate forms connecting to closely related groups would still be around, one could always argue to replace both groups by one group that includes both (and continue to do that until one is left with just a single group that includes all life) and there would be no objective arguments against doing that.
But groupings could of course still be meaningful and useful, and one could (and would probably) pragmatically define them and deal with the ambiguity of not being able to tell where one group ends and another starts.

  
midwifetoad



Posts: 4003
Joined: Mar. 2008

(Permalink) Posted: April 08 2013,13:51   

It seems to me that groups are useful because they imply relationships by descent. If we can directly determine descent for each individual, we do not need groups to discuss nesting.

It's just a thought experiment, but it seems useful to me.

--------------
Any version of ID consistent with all the evidence is indistinguishable from evolution.

  
Soapy Sam



Posts: 659
Joined: Jan. 2012

(Permalink) Posted: April 08 2013,14:18   

Quote (midwifetoad @ April 08 2013,19:51)
It seems to me that groups are useful because they imply relationships by descent. If we can directly determine descent for each individual, we do not need groups to discuss nesting.

It's just a thought experiment, but it seems useful to me.

I suppose that the entire tree - everything-that-ever-lived - is a genetic continuum. Along a branch, there is no clear point at which one species shades into another, but it's still useful - and possible, due to non-constant rate at the phenotype level - to group. If everything-that-ever-lived was still alive, and phenotypic 'distance' was regularly spaced, there'd be no taxonomy - but perhaps, no need for taxonomy. Linnaeus spotted the pattern (drawn not just by lineage extinction but anagenesis and 'dynasty formation' - some species proved a particularly ripe source of variants on the theme) and Darwin explained it.

Science on a Joe G thread. That I should live to see the day!

--------------
SoapySam is a pathetic asswiper. Joe G

BTW, when you make little jabs like “I thought basic logic was one thing UDers could handle,” you come off looking especially silly when you turn out to be wrong. - Barry Arrington

  
Henry J



Posts: 5786
Joined: Mar. 2005

(Permalink) Posted: April 08 2013,22:56   

As an analogy, look at an actual tree, where a trunk or branch splits into multiple smaller branches, and try to figure out exactly which trunk or branch is indicated by any given point in that region of that tree.

Henry

  
The whole truth



Posts: 1554
Joined: Jan. 2012

(Permalink) Posted: April 09 2013,07:13   

joey is posting with the user name A Masked Panda (-pWQ) in the "Does CSI enable us to detect Design? A reply to William Dembski" thread at Panda's Thumb.

Two examples:

"That’s just plain stupid. No one has to know “who, what, when, where, why, and how” before determining design. All of that comes from examining the design and evidence.
Did we know “who, what, when, where, why, and how” before we said Stonehenge was designed? No.
It’s as if evos are proud to be ignorant…"


"MathGrrl is an asshole. He was shown how to calculate CSI.
And what evidence do you have that says gene duplication is a blind watchmaker process?
And blipey’s string- CONTEXT matters. But seeing that you are scientifically illiterate you wouldn’t know anything about that."


ETA: DS (and others?) thinks that it's "Joe B" (atheistoclast) but it's actually joe g. joey g is trying to hide who he is in that thread but his tard is easily recognizable.

joey g also has a post on his blog about the thread at Panda's Thumb.

Edited by The whole truth on April 09 2013,07:31

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Think not that I am come to send peace on earth: I came not to send peace, but a sword. - Jesus in Matthew 10:34

But those mine enemies, which would not that I should reign over them, bring hither, and slay them before me. -Jesus in Luke 19:27

   
Robin



Posts: 1431
Joined: Sep. 2009

(Permalink) Posted: April 09 2013,09:25   

Quote (The whole truth @ April 09 2013,07:13)
joey is posting with the user name A Masked Panda (-pWQ) in the "Does CSI enable us to detect Design? A reply to William Dembski" thread at Panda's Thumb.

Two examples:

"That’s just plain stupid. No one has to know “who, what, when, where, why, and how” before determining design. All of that comes from examining the design and evidence.
Did we know “who, what, when, where, why, and how” before we said Stonehenge was designed? No.
It’s as if evos are proud to be ignorant…"


"MathGrrl is an asshole. He was shown how to calculate CSI.
And what evidence do you have that says gene duplication is a blind watchmaker process?
And blipey’s string- CONTEXT matters. But seeing that you are scientifically illiterate you wouldn’t know anything about that."

Yep. And Joe is about to have a meltdown. He just resorted to this:

Quote
Even if Intelligent Design is completely wrong, YOU still don’t have any evidence to support unguided/ blind watchmaker evolution.

So get bent…


Commence verbal diarrhea in 3...2...1...

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we IDists rule in design for the flagellum and cilium largely because they do look designed.  Bilbo

The only reason you reject Thor is because, like a cushion, you bear the imprint of the biggest arse that sat on you. Louis

  
The whole truth



Posts: 1554
Joined: Jan. 2012

(Permalink) Posted: April 09 2013,09:40   

Quote (Robin @ April 09 2013,07:25)
Quote (The whole truth @ April 09 2013,07:13)
joey is posting with the user name A Masked Panda (-pWQ) in the "Does CSI enable us to detect Design? A reply to William Dembski" thread at Panda's Thumb.

Two examples:

"That’s just plain stupid. No one has to know “who, what, when, where, why, and how” before determining design. All of that comes from examining the design and evidence.
Did we know “who, what, when, where, why, and how” before we said Stonehenge was designed? No.
It’s as if evos are proud to be ignorant…"


"MathGrrl is an asshole. He was shown how to calculate CSI.
And what evidence do you have that says gene duplication is a blind watchmaker process?
And blipey’s string- CONTEXT matters. But seeing that you are scientifically illiterate you wouldn’t know anything about that."

Yep. And Joe is about to have a meltdown. He just resorted to this:

Quote
Even if Intelligent Design is completely wrong, YOU still don’t have any evidence to support unguided/ blind watchmaker evolution.

So get bent…


Commence verbal diarrhea in 3...2...1...

Yeah, joey has an anger management problem and it doesn't take long for his meltdowns to commence. It's pretty funny when he starts by sounding civil, or at least somewhat civil, but quickly gets "bent" when "evos" question/challenge his assertions. He is SO predictable.

--------------
Think not that I am come to send peace on earth: I came not to send peace, but a sword. - Jesus in Matthew 10:34

But those mine enemies, which would not that I should reign over them, bring hither, and slay them before me. -Jesus in Luke 19:27

   
The whole truth



Posts: 1554
Joined: Jan. 2012

(Permalink) Posted: April 09 2013,10:03   

joey g, in the Dembski thread at Panda's Thumb, said:

"The genetic code is arbitrary, meaning it is not determined by any law."

That seems like a very odd statement for an IDiot to make. Aren't the IDiots, and especially joey, the ones who claim that the "genetic code" is an intrinsic property of living things and that the "genetic code" was/is programmed into the front-loaded software that was/is designed, created, and installed by 'the designer'?

If joey is saying that the "genetic code" is an arbitrary labeling system designed by humans then isn't he admitting that the "genetic code" is not an intrinsic property of living things? Am I missing something?

--------------
Think not that I am come to send peace on earth: I came not to send peace, but a sword. - Jesus in Matthew 10:34

But those mine enemies, which would not that I should reign over them, bring hither, and slay them before me. -Jesus in Luke 19:27

   
Soapy Sam



Posts: 659
Joined: Jan. 2012

(Permalink) Posted: April 09 2013,10:40   

Quote (The whole truth @ April 09 2013,16:03)
joey g, in the Dembski thread at Panda's Thumb, said:

"The genetic code is arbitrary, meaning it is not determined by any law."

That seems like a very odd statement for an IDiot to make. Aren't the IDiots, and especially joey, the ones who claim that the "genetic code" is an intrinsic property of living things and that the "genetic code" was/is programmed into the front-loaded software that was/is designed, created, and installed by 'the designer'?

If joey is saying that the "genetic code" is an arbitrary labeling system designed by humans then isn't he admitting that the "genetic code" is not an intrinsic property of living things? Am I missing something?

He means not determined by any 'natural' law. Codons don't have an obvious strong correlation with the amino acid; nothing chemical appears to compel them to have the relationship they have rather than some other. Which means nothing, of course. A mechanism of peptide bond formation was stumbled upon which proved of value, and one of the many other options would have served just as well, is at least as sound an interpretation.

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SoapySam is a pathetic asswiper. Joe G

BTW, when you make little jabs like “I thought basic logic was one thing UDers could handle,” you come off looking especially silly when you turn out to be wrong. - Barry Arrington

  
Richardthughes



Posts: 11178
Joined: Jan. 2006

(Permalink) Posted: April 09 2013,14:47   

Chubs asserts:

Quote
Yes, my IQ is much higher than fat Felsenstein's


Hmmm...

http://www.gs.washington.edu/faculty....ein.htm

Quote
2002. Felsenstein, J. Quantitative characters, phylogenies, and morphometrics. pp. 27-44 in "Morphology, Shape, and Phylogenetics", ed. N. MacLeod. Systematics Association Special Volume Series 64. Taylor and Francis, London.

2002. Felsenstein, J. Contrasts for a within-species comparative method. pp. 118-129 in "Modern Developments in Theoretical Population Genetics", ed. M. Slatkin and M. Veuille. Oxford University Press, Oxford.

2004.  Felsenstein, J. Inferring Phylogenies. Sinauer Associates, Sunderland, Massachusetts.

2005. Felsenstein, J. Using the quantitative genetic threshold model for inferences between and within species. Philosophical Transactions of the Royal Society of London, series B 360: 1427-1434.

2006. Accuracy of coalescent likelihood estimates: Do we need more sites, more sequences, or more loci? Molecular Biology and Evolution 23: 691-700.

2007. Trees of genes in populations. pp. 3-29 in Reconstructing Evolution. New Mathematical and Computational Advances, ed. O. Gascuel and M. Steel. Clarendon Press, Oxford.

2007. Has natural selection been refuted? The arguments of William Dembski. Reports of the National Center for Science Education 27 (3-4): 20-26.

2008. Comparative methods with sampling error and within-species variation: contrasts revisited and revised. American Naturalist 171: 713-725.

2008. (A. RoyChoudhury, J. Felsenstein, and E. A. Thompson). A two-stage pruning algorithm for likelihood computation for a population tree. Genetics
180: 1095-1105.


That or ticks & watermelons, dragonflies playing, Pyramidology and the CSI or CAEK by letter-counting?

Tough call.

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"Richardthughes, you magnificent bastard, I stand in awe of you..." : Arden Chatfield
"You magnificent bastard! " : Louis
"ATBC poster child", "I have to agree with Rich.." : DaveTard
"I bow to your superior skills" : deadman_932
"...it was Richardthughes making me lie in bed.." : Kristine

  
midwifetoad



Posts: 4003
Joined: Mar. 2008

(Permalink) Posted: April 09 2013,14:51   

That thread on PT inspires me to ask whatever happened to MESA.

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Any version of ID consistent with all the evidence is indistinguishable from evolution.

  
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